Table 1 Quality control and data statistics for clean reads
Sample | Read Number | Base Number | Q20 (%) | GC (%) |
|---|---|---|---|---|
T1-1 | 19,890,704 | 5,967,211,200 | 96.27 | 43.88 |
T1-2 | 26,650,589 | 7,995,176,700 | 97.3 | 42.33 |
T1-3 | 26,117,263 | 7,835,178,900 | 96.75 | 42.03 |
T2-1 | 24,548,501 | 7,364,550,300 | 96.37 | 41.98 |
T2-2 | 27,839,800 | 8,351,940,000 | 96.79 | 42.33 |
T2-3 | 22,634,087 | 6,790,226,100 | 96.49 | 42.41 |
T3-1 | 22,242,889 | 6,672,86,6700 | 96.03 | 42.13 |
T3-2 | 23,240,591 | 6,972,177,300 | 95.73 | 39.3 |
T3-3 | 22,623,624 | 6,787,087,200 | 95.95 | 41.17 |
T4-1 | 25,169,433 | 7,550,829,900 | 96.12 | 41.67 |
T4-2 | 36,997,530 | 11,099,259,000 | 96.51 | 40.33 |
T4-3 | 19,252,691 | 5,775,807,300 | 97.47 | 39.92 |
T5-1 | 19,972,636 | 5,991,790,800 | 96.56 | 41.74 |
T5-2 | 25,857,241 | 7,757,172,300 | 96.47 | 41.36 |
T5-3 | 20,919,661 | 6,275,898,300 | 96.61 | 41.38 |