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Table 5 Total numbers of Mono-, Di-, and Trinucleotide repeats in introns among 14 fish genomes

From: Genome-wide characterization of microsatellite DNA in fishes: survey and analysis of their abundance and frequency in genome-specific regions

Repeated unit

O. latipes

D. rerio

O. niloticus

T. rubripes

E. lucius

L. oculatus

O. mykiss

C. carpio

I. punctatus

C. semilaevis

A. mexicanus

N. furzeri

P. reticulata

O. kisutch

A

54,469

168,546

65,095

10,417

20,201

13,989

41,783

176,323

142,517

74,854

143,668

17,966

102,376

34,546

C

11,110

8113

7349

12,124

19,575

3979

44,066

5666

14,260

12,080

13,067

13,704

4070

58,278

AC

14,896

151,933

72,301

36,853

107,530

6473

219,574

102,632

180,297

71,964

142,073

99,236

48,930

25,072

AG

1311

16,700

12,758

4675

19,458

3157

116,077

26,618

78,058

20,922

112,135

11,308

9216

195,437

AT

4937

129,210

20,624

1546

11,767

2307

38,935

47,442

64,634

25,056

160,352

8320

10,458

35,958

CG

55

255

135

100

145

33

162

69

392

63

58

322

134

113

AAC

896

9018

4035

543

796

1633

3550

5763

10,973

4836

1646

146

1911

2654

AAG

762

2806

2699

350

173

393

1874

2606

5733

4440

4239

3781

2253

1683

AAT

4610

88,156

11,327

1362

3558

11,224

10,690

37,268

45,617

10,492

31,950

8898

9074

8967

ACC

539

677

941

448

921

764

1297

293

1217

783

1134

964

394

1954

ACG

706

508

1153

692

96

264

681

589

428

5941

2032

1125

1183

940

ACT

115

3189

858

354

652

226

2025

1107

3542

1476

2492

4481

388

2846

AGC

517

296

511

749

69

223

715

288

242

2754

2028

1291

926

542

AGG

1671

1427

2156

1359

679

694

3286

630

1678

6136

2180

78

1747

4327

ATC

1005

8440

2186

929

2092

975

7870

2708

10,070

3209

5727

1278

1605

7564

CCG

151

64

77

337

38

113

17

46

61

303

121

35

162

17