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Table 1 Differentially regulated autophagy genes

From: RNAseq and quantitative proteomic analysis of Dictyostelium knock-out cells lacking the core autophagy proteins ATG9 and/or ATG16

Gene ID

Gene Name

ATG9‾

ATG16‾

ATG9‾/16‾

FC

p-value

FC

p-value

FC

p-value

DDB_G0292390

atg1

1.67

0.000

1.65

0.000

1.12

0.167

DDB_G0286191

atg8a

1.40

0.000

1.63

0.000

0.98

0.756

DDB_G0290491

atg8b

2.24

0.000

2.15

0.000

1.18

0.032

DDB_G0285375

atg18

1.39

0.004

1.57

0.000

0.95

0.621

DDB_G0285323

atg9

0.45

0.000

1.42

0.002

0.34

0.000

DDB_G0275323

atg16

1.06

0.432

0.22

0.000

0.21

0.000

DDB_G0268840

atg10

0.76

0.245

0.55

0.033

0.87

0.505

DDB_G0269162

atg13

1.24

0.054

1.39

0.016

0.17

0.000

DDB_G0270098

sqstm1

1.60

0.005

1.55

0.024

0.97

0.860

  1. FC fold change