Fig. 3
From: MicroPIPE: validating an end-to-end workflow for high-quality complete bacterial genome construction
Polishing results for EC958 ONT Flye assembly: Comparative analysis of (i) long read polishing only, (ii) short read polishing only, and (iii) sequential long read and short read polishing, using various tool combinations. Comparison metrics were the number of SNPs/indels to the EC958 reference genome standard (by DNAdiff), run time and quality score (by Poxomis assess_assembly)