Fig. 3
From: Genome-wide expression and network analyses of mutants in key brassinosteroid signaling genes
Differentially expressed genes (DEGs relative to WS2) being compared between bri1–5 and its three suppressors. Group A (restored genes, 270 genes): genes differentially expressed in the bri1–5 mutant but no longer in at least two of the suppressor lines; Group B (compensatory genes, 178 genes): genes that are differentially expressed in at least two suppressors but not in bri1–5; Group C (genes that were not restored, 371 genes): Genes that are aberrantly expressed in bri1–5 and at least two of the suppressor lines. Group D (333 genes), E (167), and F (94 genes) contain genes that are exclusively differentially expressed in respectively the bri1–5/brs1–1D, bri1–5/bri1–1D, and bri1–5/bak1–1D suppressor lines. The “core” below the number indicates the most reliable set for the group. The total number of potentially interesting genes is 1430