Table 1 Functional annotation of genes co-expressed with flowering genes
Flowering gene | Candidate flowering time genes | Position in IWGSC1.1/Mb | Function annotation | Log2(FC) | p-value |
|---|---|---|---|---|---|
Vrn1-5A | TraesCS2D02G181400 | 2D: 126.124 ~ 126.149 | MADS-box transcription factor | 4.72 | 3.90 × 10-18 |
Vrn3-7B | TraesCS5A02G166100 | 5A: 355.071 ~ 355.072 | CONSTANS-like protein | 3.66 | 8.66 × 10-5 |
TraesCS2D02G147100 | 2D: 88.087 ~ 88.089 | Gibberellin receptor GID1A | 3.88 | 3.05 × 10-5 | |
TraesCS5D02G170700 | 5D: 267.762 ~ 267.764 | CONSTANS-like protein | 4.16 | 3.56 × 10-5 | |
Ppd-1D | TraesCS1A02G220300 | 1A: 389.129 ~ 389.131 | CONSTANS-like protein | -2.39 | 6.10 × 10-4 |
TraesCS1B02G326800 | 1B: 553.024 ~ 553.025 | Early light-induced protein | -3.15 | 1.27 × 10-5 | |
TraesCS1B02G326900 | 1B: 553.135 ~ 553.136 | Early light-induced protein | -7.17 | 1.02 × 10-12 | |
TraesCS1A02G314800 | 1A: 506.473 ~ 506.476 | Early light-induced protein | -4.09 | 3.21 × 10-3 | |
WSOC1 | TraesCS3A02G143100 | 3A:124.172 ~ 124.176 | Flowering locus T | 2.74 | 1.69 × 10-7 |
TraesCS2B02G200800 | 2B: 180.040 ~ 180.060 | MADS-box transcription factor | 2.43 | 8.77 × 10-7 | |
TraesCS3D02G144500 | 3D: 132.976 ~ 132.977 | Flowering locus T | 2.28 | 2.95 × 10-4 | |
TraesCS3B02G162000 | 3B: 158.715 ~ 158.719 | Flowering locus T | 1.13 | 8.54 × 10-4 | |
TraesCS5A02G515500 | 5A: 747.807 ~ 757.809 | MADS-box transcription factor | 1.39 | 8.45 × 10-4 | |
TraesCS3D02G144500 | 3D: 132.976 ~ 132.977 | Flowering locus T | 2.28 | 2.95 × 10-4 |