Skip to main content

Table 2 List of genes in the chloroplast genomes of the Impatiens species

From: Comparative chloroplast genome analysis of Impatiens species (Balsaminaceae) in the karst area of China: insights into genome evolution and phylogenomic implications

Function of Genes Group of Genes Gene Names
Photosynthesis-related genes Rubisco rbcL
Photosystem I psaA, psaB, psaC, psaI, psaJ
Assembly and stability of Photosystem I ycf3**, ycf4
Photosystem II psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ,
ATP synthase atpA, atpB, atpE, atpF*, atpH, atpI
Cytochrome b/f complex petA, petB*, petD, petG, petL, petN
Cytochrome c synthesis ccsA
NADPH dehydrogenase ndhA*, ndhB*(2), ndhC, ndhD, ndhE, ndhF, ndhG ndhH, ndhI, ndhJ, ndhK
Transcription- and translation-related genes Transcription rpoA, rpoB, rpoC1*, rpoC2
Ribosomal proteins rpl2*(2), rpl14, rpl16, rpl20, rpl22, rpl23(2), rpl33, rpl36, rps2, rps3, rps4, rps7(2), rps8, rps11, rps12*(2), rps14, rps15, rps16*, rps18, rps19(2)
RNA genes Ribosomal RNA rrn4.5, rrn5, rrn16, rrn23
Transfer RNA trnA-UGC(2), trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnfM-CAU, trnG-GCC*, trnG-UCC, trnH-GUG, trnI-CAU*(2), trnI-GAU(2), trnK-UUU*, trnL-CAA(2), trnL-UAG, trnL-UAA*, trnM-CAU, trnN-GUU(2), trnP-UGG, trnQ-UUG, trnR-ACG(2), trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GAC(2), trnV-UAC*, trnW-CCA, trnY-GUA
Other genes RNA processing matK
Carbon metabolism cemA
Fatty acid synthesis accD
Proteolysis clpP**
Genes of unknown function Conserved reading frames ycf1, ycf2(2), ycf15(2)
  1. (2) indicates that m (the number of repeat units) is 2; *Gene contains one intron; **Gene contains two introns