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Table 5 CRISPR elements found in studied S. intermedius strains

From: Pangenome analysis and virulence profiling of Streptococcus intermedius

Strain DR length (nt) Number of spacers Spacer Length (nt) CRISPR length (nt) CRISPR type DR consensus
G1562 32 23 33-37 1555 CAS-TypeIC ATTTCAATCCACGCACCCGCGAAGGGTGCGAC
G1563 32 24 33-38 1632 CAS-TypeIC ATTTCAATCCACGCACCCGCGAAGGGTGCGAC
G1564 32 17 33-38 1166 CAS-TypeIC ATTTCAATCCACGCACCCGCGAAGGGTGCGAC
32 6 33-35 429   ATTTCAATCCACGCACCCGCGAAGGGTGCGAC
G1565 36 33 29-31 2215 CAS-TypeIIC GTTTTACAGTTACTTAAATCTTGAGAGTACAAAAAC
36 9 20-30 628   GTTTTACAGTTACTTAAATCTTGAGAGTACAAAAAC
G1566 -      
G1567 -      
G1568 -      
TYG1620 -      
BA1 -      
FDAARGOS_233 36 17 29-30 1155 CAS-TypeIIA GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
G1552 36 23 29-30 1550 CAS-TypeIIC GTTTTACAGTTACTTAAATCTTGAGAGTACAAAAAC
G1553 -      
G1556 32 6 33-35 427 CAS-TypeIC GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT
G1557 -      
B196 36 19 29-30 1288 CAS-TypeIIC GTTTTTGTACTCTCAAGATTTAAGTAACTGCAAAAC
C270 -      
G1554 32 44 33-36 2950 CAS-TypeIC ATTTCAATCCACGCACCCGCGAAGGGTGCGAC
631_SCON 32 1 33 96 CAS-TypeIC GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT
24 1 32 79   ATGTACTTTATTTAAGTGAACACT
KCOM 1545 35 1 31 100 CAS-TypeIIA GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAA
F0413 -      
G1555 36 38 29-31 2540 CAS-TypeIIC GTTTTACAGTTACTTAAATCTTGAGAGTACAAAAAC
LC4 -      
30309 32 27 34-38 1830 CAS-TypeIC ATTTCAATCCACGCACCCGCGAAGGGTGCGAC
32811 36 5 30 365 CAS-TypeIIC GTTTTACAGTTACTTAAATCTTGAGAGTACAAAAAC
ATCC 27335 -      
JTH08 -      
SK54AJKN01 -