Exploring the genomic resources and analysing the genetic diversity and population structure of Chinese indigenous rabbit breeds by RAD-seq

Table 1 Comparison of population genetic parameters in six Chinese indigenous rabbit breeds and two imported rabbit breeds

Breed	N	π	Ho	He	Average_Fis	Average_F_ST
Sichuan White Rabbit	629,467	0.00009980	0.2137	0.2805	0.2382	0.1433
New Zealand Rabbit	631,023	0.0001012	0.1917	0.2843	0.3256	0.1431
Belgian Rabbit	581,987	0.00009590	0.2005	0.2619	0.2345	0.1562
Jiuyishan rabbit	695,290	0.0001128	0.2470	0.3178	0.2226	0.09439
Wanzai Rabbit	606,627	0.00009320	0.1988	0.2617	0.2403	0.1696
Yunnan colorful Rabbit	533,939	0.00009740	0.2261	0.2464	0.08230	0.1524
Min xi’nan Black Rabbit	621,517	0.00009620	0.2151	0.2698	0.2026	0.1524
Fujian Yellow Rabbit	670,654	0.0001096	0.2255	0.3072	0.2660	0.1083

N Number of SNPs, π Nucleotide diversity, Ho Observed heterozygosity, He Expected heterozygosity; F_IS, inbreeding coefficient; F_ST, population differentiation index

ISSN: 1471-2164