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Table 2 Top 5 enriched GO terms of the differentially expressed genes during encystment

From: Transcriptome and metabolome analyses of cold and darkness-induced pellicle cysts of Scrippsiella trochoidea

 

GO ID

Term

Annotated

Significant

Expected

KS

CK vs. D5

BP

GO:0006412

translation

482

99

17.58

2.50E-14

 

GO:0055114

oxidation-reduction process

367

23

13.39

8.40E-06

 

GO:0015991

ATP hydrolysis coupled proton transport

32

3

1.17

2.40E-05

 

GO:0009765

photosynthesis, light harvesting

50

2

1.82

1.70E-04

 

GO:0006108

malate metabolic process

11

1

0.4

4.60E-04

MF

GO:0003735

structural constituent of ribosome

299

92

10.62

3.00E-22

 

GO:0016168

chlorophyll binding

47

1

1.67

6.70E-04

 

GO:0019829

cation transporting ATPase activity

45

2

1.6

7.20E-04

 

GO:0030060

 L-malate dehydrogenase activity

8

1

0.28

8.00E-04

 

GO:0009055

electron carrier activity

45

9

1.6

8.60E-04

CC

GO:0022627

cytosolic small ribosomal subunit

73

29

3.47

1.10E-09

 

GO:0022625

cytosolic large ribosomal subunit

111

36

5.28

2.50E-08

 

GO:0005840

ribosome

337

97

16.02

1.90E-05

 

GO:0009535

chloroplast thylakoid membrane

76

3

3.61

2.20E-03

 

GO:0015935

small ribosomal subunit

93

34

4.42

4.00E-03

CK vs. PC

BP

GO:0015991

ATP hydrolysis coupled proton transport

32

4

0.94

3.20E-06

 

GO:0009765

photosynthesis, light harvesting

50

3

1.48

2.90E-05

 

GO:0018298

protein-chromophore linkage

46

3

1.36

6.90E-05

 

GO:0055114

oxidation-reduction process

367

12

10.83

9.20E-05

 

GO:0006006

glucose metabolic process

47

2

1.39

1.09E-03

MF

GO:0016168

chlorophyll binding

47

3

1.52

4.90E-05

 

GO:0016616

oxidoreductase activity, NAD or NADP as acceptor

66

1

2.14

6.20E-04

 

GO:0019829

cation transporting ATPase activity

45

1

1.46

6.20E-04

 

GO:0003677

DNA binding

87

9

2.82

6.40E-04

 

GO:0003735

structural constituent of ribosome

299

17

9.69

8.50E-04

CC

GO:0009535

chloroplast thylakoid membrane

76

4

2.3

3.20E-04

 

GO:0034357

photosynthetic membrane

97

8

2.94

3.20E-04

 

GO:0005840

ribosome

337

17

10.22

5.40E-04

 

GO:0044454

nuclear chromosome part

32

1

0.97

3.98E-03

 

GO:0045263

proton-transporting ATP synthase complex, coupling factor F0

8

3

0.24

4.13E-03

  1. CK represents the control group of vegetative cells in the exponential phase, D5 represents the group treated with cold and darkness for five hours, PC represents the group of pellicle cysts. BP, MF and CC represent biological process, molecular function and cellular component, respectively.
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BMC Genomics

ISSN: 1471-2164

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