Table 1 Genes identified in the Poplar trichocarpa DUB family
From: The DUB family in Populus: identification, characterization, evolution and expression patterns
Subfamily | Gene name | Gene ID | Subfamily | Gene name | Gene ID |
|---|---|---|---|---|---|
UBP | PtrUBP1 | Potri.017G055600 | UBP | PtrUBP2 | Potri.001G315600 |
UBP | PtrUBP3 | Potri.007G093600 | UBP | PtrUBP4 | Potri.005G074900 |
UBP | PtrUBP5.1 | Potri.016G031900 | UBP | PtrUBP5.2 | Potri.006G033800 |
UBP | PtrUBP6 | Potri.003G033700 | UBP | PtrUBP7 | Potri.001G197400 |
UBP | PtrUBP8.1 | Potri.016G067400 | UBP | PtrUBP8.2 | Potri.006G201100 |
UBP | PtrUBP8.3 | Potri.001G214800 | UBP | PtrUBP9 | Potri.001G449000 |
UBP | PtrUBP10 | Potri.011G152500 | UBP | PtrUBP12.1 | Potri.006G198300 |
UBP | PtrUBP12.2 | Potri.016G064100 | UBP | PtrUBP13.1 | Potri.008G012600 |
UBP | PtrUBP13.2 | Potri.010G245100 | UBP | PtrUBP14.1 | Potri.011G125800 |
UBP | PtrUBP14.2 | Potri.001G408800 | UBP | PtrUBP15.1 | Potri.001G378900 |
UBP | PtrUBP15.2 | Potri.011G095200 | UBP | PtrUBP16 | Potri.002G104800 |
UBP | PtrUBP17 | Potri.005G156900 | UBP | PtrUBP18.1 | Potri.018G009500 |
UBP | PtrUBP18.2 | Potri.018G011200 | UBP | PtrUBP19 | Potri.006G270600 |
UBP | PtrUBP20 | Potri.003G092400 | UBP | PtrUBP21 | Potri.001G142000 |
UBP | PtrUBP22.1 | Potri.018G123200 | UBP | PtrUBP22.2 | Potri.006G266100 |
UBP | PtrUBP22.3 | Potri.018G017000 | UBP | PtrUBP23.1 | Potri.006G185200 |
UBP | PtrUBP23.2 | Potri.018G107500 | UBP | PtrUBP24 | Potri.003G202800 |
UBP | PtrUBP25.1 | Potri.011G112800 | UBP | PtrUBP25.2 | Potri.001G394600 |
UBP | PtrUBP26.1 | Potri.005G179500 | UBP | PtrUBP26.2 | Potri.002G081600 |
UBP | PtrUBP27 | Potri.007G077100 | UBP | PtrUBP28 | Potri.006G010100 |
UBP | PtrUBP29 | Potri.016G014000 | UBP | PtrUBP30 | Potri.015G066500 |
UBP | PtrUBP31 | Potri.012G071900 | UBP | PtrUBP32 | Potri.017G089250 |
UCH | PtrUCH1 | Potri.004G130400 | UCH | PtrUCH2 | Potri.017G075200 |
UCH | PtrUCH3 | Potri.003G081000 | OTU | PtrOTU1.1 | Potri.003G162600 |
OTU | PtrOTU1.2 | Potri.001G067400 | OTU | PtrOTU2.1 | Potri.011G139500 |
OTU | PtrOTU2.2 | Potri.001G430200 | OTU | PtrOTU2.3 | Potri.001G435500 |
OTU | PtrOTU3 | Potri.016G110400 | OTU | PtrOTU4.1 | Potri.016G050900 |
OTU | PtrOTU4.2 | Potri.006G057400 | OTU | PtrOTU4.3 | Potri.008G177400 |
OTU | PtrOTU4.4 | Potri.010G234300 | OTU | PtrOTU4.5 | Potri.008G026100 |
OTU | PtrOTU5 | Potri.014G134100 | OTU | PtrOTLD1.1 | Potri.009G160100 |
OTU | PtrOTLD1.2 | Potri.004G196800 | OTU | PtrOTU7 | Potri.005G140500 |
OTU | PtrOTU9.1 | Potri.008G036900 | OTU | PtrOTU9.2 | Potri.008G036700 |
OTU | PtrOTU9.3 | Potri.010G225400 | OTU | PtrOTU10.1 | Potri.016G094700 |
OTU | PtrOTU10.2 | Potri.006G125900 | OTU | PtrOTU11.1 | Potri.016G019700 |
OTU | PtrOTU11.2 | Potri.006G021700 | OTU | PtrOTU12 | Potri.014G140200 |
MJD | PtrMJD1 | Potri.001G249400 | MJD | PtrMJD2 | Potri.006G095700 |
MJD | PtrMJD3 | Potri.009G043400 | MJD | PtrMJD4 | Potri.016G110300 |
JAMM | PtrBRCC36AA | Potri.001G172800 | JAMM | PtrBRCC36B | Potri.002G233500 |
JAMM | PtrBRCC36C | Potri.014G147100 | JAMM | PtrBRCC36D | Potri.010G192000 |
JAMM | PtrBRCC36E | Potri.010G192200 | JAMM | PtrBRCC36F | Potri.008G065300 |
JAMM | PtrBRCC36G | Potri.008G065200 | JAMM | PtrRPN11.1 | Potri.002G127900 |
JAMM | PtrRPN11.2 | Potri.014G032900 | JAMM | PtrAMSH1 | Potri.015G045800 |
JAMM | PtrAMSH2 | Potri.010G041200 | JAMM | PtrAMSH3 | Potri.010G141100 |
JAMM | PtrCSN5A | Potri.018G006100 | JAMM | PtrCSN5B | Potri.006G275100 |