Table 3 QTL for anther color and hull color identified by high-density SNP bin map
Trait | QTL | Chr | Peak(cM) | Marker_interval | Map_interval(cM) | Distance_interval(bp) | LOD | Additive_effect | R2(%) |
|---|---|---|---|---|---|---|---|---|---|
Anther Color | qAC1 | 6 | 236.21 | Chr6_bin141-Chr6_bin142 | 232.198-238.452 | 34,039,911–34,200,621 | 169.01 | 0.47 | 0.89 |
Anther Color | qAC2 | 6 | 248.86 | Chr6_bin152-Chr6_bin153 | 248.847-250.449 | 34,820,013–34,877,940 | 108.63 | 0.43 | 0.72 |
Hull Color | qHC1 | 1 | 7.51 | Chr1_bin4-Chr1_bin5 | 5.497–8.528 | 2,615,096–5,411,711 | 152.64 | 0.48 | 0.90 |
Hull Color | qHC2 | 1 | 10.27 | Chr1_bin7-Chr1_bin8 | 10.258–11.110 | 5,485,413–5,698,001 | 143.69 | 0.45 | 0.82 |
Hull Color | qHC3 | 1 | 12.93 | Chr1_bin10-Chr1_bin11 | 12.918–14.584 | 5,745,038–5,989,490 | 133.79 | 0.45 | 0.80 |