QTL | Gene name | Position (bp) | Reference allele | Variant allele | Variant effect | Description |
---|---|---|---|---|---|---|
IRA1AC | Seita.6G228600.v2.2 | 34,176,600 | C | T | nonsynonymous | S-acyltransferase 7 |
Seita.6G228700.v2.2 | 34,188,715 | T | C | nonsynonymous | uncharacterized protein | |
34,188,806 | G | C | nonsynonymous | |||
34,188,814 | A | C | nonsynonymous | |||
34,188,829 | C | CCGCGGAGGG | Non frameshift insertion | |||
34,188,867 | G | C | nonsynonymous | |||
34,188,911 | C | A | nonsynonymous | |||
34,188,941 | T | G | nonsynonymous | |||
IRA2HC | Seita.1G057100.v2.2 | 5,482,347 | G | A | nonsynonymous | UDP-glucose glucosyltransferase |
Seita.1G057300.v2.2 | 5,496,605 | A | G | nonsynonymous | cinnamyl alcohol dehydrogenase | |
IRA3HC | Seita.1G060200.v2.2 | 5,699,160 | A | G | nonsynonymous | sucrose-phosphate synthase 2 |