Table 1 Assembly statistics for the Cairina moschata genome sequence reported in this study and comparison to the previously sequenced Anas platyrhynchos genome
From: A chromosome-level genome assembly of Cairina moschata and comparative genomic analyses
Assembly | Cairina moschata | Anas platyrhynchos |
|---|---|---|
Contig N50 | 326,005 | 2,706,497 |
Scaffold N50 | 77,345,420 | 76,129,154 |
Scaffold N90 | 9,745,227 | 10,039,220 |
Number of scaffolds ( > = 1Kb) | 4,613 | 2,150 |
Number of long scaffolds ( > = 1 Mb) | 39 | 30 |
Largest scaffold (bp) | 194,810,853 | 202,842,836 |
Total scaffold size (bp) | 1,118,556,028 | 1,126,176,092 |
GC/N (%) | 41.02/1.34 | 41.53/0.26 |
BUSCO genome completeness | C:93.3 %,F:2.4 %,M:4.3 % | C:89.1 %,F:3.1 %,M:7.8 % |