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Fig. 2 | BMC Genomics

Fig. 2

From: LncGSEA: a versatile tool to infer lncRNA associated pathways from large-scale cancer transcriptome sequencing data

Fig. 2

LncGSEA predicted pathways that are associated with eight well-studied lncRNAs in cancer. GSEA was used to test for enrichment of MSigDB hallmark gene sets in TCGA tumor gene expression data ordered based on differential expression genes (DGE) or guilt by association (GBA) methods in breast (BRCA), colon (COAD), lung (LUAD), ovarian (OV) and prostate (PRAD) cancer. Cancer-hallmark signature genes were plotted based on their normalized enrichment score

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BMC Genomics

ISSN: 1471-2164

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