Table 2 Genome characteristics, number of scaffolds and BUSCO scores (genome completeness) for wCer1, wCer4, wCer5 (in bold) and the genomes of 16 reference strains (ordered by supergroups A and B, and then alphabetically)
Strain | Host | Supergroup | Accession No. | Genome size (bp) | Number of scaffolds | GC% | Predicted CDSs | tRNAs | rRNAs | BUSCO score |
|---|---|---|---|---|---|---|---|---|---|---|
wAu | Drosophila simulans | A | LK055284 | 1,268,461 | 1 | 35.2 | 1276 | 34 | 1 of each | 185 (83.7%) |
wCauA | Carposina sasakii | A | NZ_CP041215 | 1,449,344 | 1 | 35.0 | 1442 | 34 | 1 of each | 184 (83.3%) |
wCer1 | Rhagoletis cerasi (RcerHB) | A | JADCNC01000000 | 1,255,676 | 16 | 35.2 | 1196 | 34 | 1 of each | 183 (82.8%) |
wCer2 | Drosophila simulans (DsimRC50) | A | SOZK01000000 | 1,325,568 | 11 | 35.2 | 1259 | 34 | 1 of each | 184 (83.3%) |
wCer4 | C. capitata (Ccap10.3) | A | JADCND01000000 | 1,239,646 | 65 | 35.1 | 1214 | 34 | 1 of each | 184 (83.3%) |
wHa | Drosophila simulans | A | NC_021089 | 1,295,804 | 1 | 35.1 | 1235 | 34 | 1 of each | 183 (82.8%) |
wIrr | Haematobia irritans irritans | A | NZ_CP037426 | 1,352,354 | 1 | 35.3 | 1439 | 34 | 1 of each | 184 (83.3%) |
wMeg | Chrysomya megacephala | A | NZ_CP021120 | 1,376,868 | 1 | 34.0 | 1298 | 34 | 1 of each | 182 (82.4%) |
wMel | Drosophila melanogaster | A | NC_002978 | 1267,782 | 1 | 35.2 | 1271 | 34 | 1 of each | 184 (83.3%) |
wRec | Drosophila recens | A | NZ_JQAM01000000 | 1,126,656 | 43 | 35.1 | 1111 | 34 | 1 of each | 181 (81.9%) |
wRi | Drosophila simulans | A | NC_012416 | 1,445,873 | 1 | 35.2 | 1396 | 34 | 1 of each | 183 (82.8%) |
wSuz | Drosophila suzukii | A | NZ_CAOU02000000 | 1,415,350 | 110 | 35.7 | 1321 | 34 | 1 of each | 184 (83.3%) |
wVitA | Nasonia vitripennis | A | NZ_MUJM01000000 | 1,211,929 | 142 | 35.1 | 1097 | 34 | 1 of each | 185 (83.7%) |
wAlbB | A. albopictus | B | NZ_CP031221 | 1,484,007 | 1 | 34.4 | 1418 | 34 | 1 of each | 180 (81.4%) |
wCer5 | Rhagoletis cerasi (RcerAS) | B | JADCNE01000000 | 1,180,723 | 57 | 33.9 | 1091 | 34 | 1 of each | 179 (81.0%) |
wDi | Diaphorina citri | B | CP051264 | 1,538,623 | 1 | 33.9 | 1418 | 34 | 1 of each | 184 (83.3%) |
wNo | Drosophila simulans | B | NC_021084 | 1,301,823 | 1 | 34.0 | 1220 | 34 | 1 of each | 184 (83.3%) |
wPip | Culex quinquefasciatus | B | NC_010981 | 1,482,455 | 1 | 34.2 | 1410 | 34 | 1 of each | 181 (81.9%) |
wStri | Laodelphax striatellus | B | NZ_MUIX01000000 | 1,786,382 | 2 | 33.8 | 1747 | 34 | 1 of each | 183 (82.9%) |