Fig. 6

Phylogeny of Gr1106 effector genes of both Gr-Line19 (green) and Gr-Line22 (dark red). A multiple sequence alignment was made using MUSCLE on the coding sequence. A phylogenetic tree was made using RAxML using a GTRGAMMA model, validated by 100 bootstrap replicates. Bootstrap values < 50 % are indicated by a “-”. Lighter shades of green or red indicate effector variants that lack a signal peptide for secretion. Boxed clusters (Roman I - II) highlight asymmetric representations of variants among the two G. rostochiensis lines. Dashed lines are used in case there was uncertainty about the location of the 5’end of a given effector family variant