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Table 1 Comparative genome statistics of three G. rostochiensis genome assemblies

From: Comparative genomics of two inbred lines of the potato cyst nematode Globodera rostochiensis reveals disparate effector family-specific diversification patterns

G. rostochiensis population

Assembly

ID

Size (Mb)

# scaffolds

Scaffold N50

(Mb)

BUSCO results

(in %)

Single

duplicated

fragmented

missing

Ro1 population from JHI PCN collection (JHI-Ro1)

nGr.v1.0

[16]

96

4377

0.085

82.8

1.0

8.3

7.9

Gr-Line19

Gr19v10

92

173

1.70

82.2

1.7

7.9

8.2

Gr-Line22

Gr22v10

101

189

1.80

81.5

1.3

8.3

8.9

  1. BUSCO (Benchmarking Universal Single-Copy Orthologs) - eukaryota_odb10