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Table 3 Genetic diversity parameters and genotyping errors of 13 STR markers evaluated in 113 bear genotypes

From: First core microsatellite panel identification in Apennine brown bears (Ursus arctos marsicanus): a collaborative approach

Locus Multiplex A Ne Ho He I HWE PID PIDsib ADO FA
CXX20 3 3 2.6 0.655 0.619 1.02 ns 0.22 0.50 0.085 0.023
REN144A06 3 3 2.5 0.670 0.605 0.99 ns 0.24 0.51 0.076 0.039
G1D 2 3 2.3 0.670 0.573 0.95 ns 0.25 0.53 0 0
Mu51 1 3 2.2 0.554 0.560 0.94 ns 0.26 0.53 0.013 0
G10B 2 3 2.0 0.518 0.513 0.75 ns 0.36 0.58 0.159 0
G10C 1 3 2.0 0.509 0.501 0.71 ns 0.37 0.59 0 0
Mu59 2 2 1.9 0.554 0.488 0.68 ns 0.38 0.60 0 0
Mu11 1 3 1.8 0.333 0.456 0.67 p < 0.05 0.39 0.62 0.071 0
Mu05 1 2 1.8 0.500 0.459 0.65 ns 0.40 0.62 0.058 0
G10L 2 2 1.7 0.491 0.439 0.63 ns 0.41 0.63 0.052 0
Mu50 1 2 1.8 0.429 0.448 0.64 ns 0.41 0.63 0 0
G10P 1 2 1.2 0.180 0.207 0.36 ns 0.65 0.81 0.083 0
Mu15 2 2 1.2 0.188 0.170 0.31 ns 0.71 0.84 0 0.035
  1. The table includes the number of PCR multiplexes, number of alleles (A), effective number of alleles (Ne), expected (He) and observed (Ho) heterozygosity, Shannon information index (I), Hardy-Weinberg equilibrium (HWE), probability of identity for unrelated individuals (PID) and for siblings (PIDsib), allelic dropouts (ADO), false alleles (FA). STR loci are listed from the most to the least informative