First core microsatellite panel identification in Apennine brown bears (Ursus arctos marsicanus): a collaborative approach

Table 3 Genetic diversity parameters and genotyping errors of 13 STR markers evaluated in 113 bear genotypes

Locus	Multiplex	A	N_e	H_o	H_e	I	HWE	P_ID	P_IDsib	ADO	FA
CXX20	3	3	2.6	0.655	0.619	1.02	ns	0.22	0.50	0.085	0.023
REN144A06	3	3	2.5	0.670	0.605	0.99	ns	0.24	0.51	0.076	0.039
G1D	2	3	2.3	0.670	0.573	0.95	ns	0.25	0.53	0	0
Mu51	1	3	2.2	0.554	0.560	0.94	ns	0.26	0.53	0.013	0
G10B	2	3	2.0	0.518	0.513	0.75	ns	0.36	0.58	0.159	0
G10C	1	3	2.0	0.509	0.501	0.71	ns	0.37	0.59	0	0
Mu59	2	2	1.9	0.554	0.488	0.68	ns	0.38	0.60	0	0
Mu11	1	3	1.8	0.333	0.456	0.67	p < 0.05	0.39	0.62	0.071	0
Mu05	1	2	1.8	0.500	0.459	0.65	ns	0.40	0.62	0.058	0
G10L	2	2	1.7	0.491	0.439	0.63	ns	0.41	0.63	0.052	0
Mu50	1	2	1.8	0.429	0.448	0.64	ns	0.41	0.63	0	0
G10P	1	2	1.2	0.180	0.207	0.36	ns	0.65	0.81	0.083	0
Mu15	2	2	1.2	0.188	0.170	0.31	ns	0.71	0.84	0	0.035

The table includes the number of PCR multiplexes, number of alleles (A), effective number of alleles (N_e), expected (H_e) and observed (H_o) heterozygosity, Shannon information index (I), Hardy-Weinberg equilibrium (HWE), probability of identity for unrelated individuals (P_ID) and for siblings (P_IDsib), allelic dropouts (ADO), false alleles (FA). STR loci are listed from the most to the least informative

ISSN: 1471-2164