| Illumina HiSeq 2000 | PacBio RSII | Oxford Nanopore MinION MkI | BioNano Genomics Irys |
---|---|---|---|---|
Source | Male Embryos | Male Embryos | Male Embryosa | Male pupae |
Library | Paired-Enda | SMRTBell | MAP002-006 (2D) | IrysPrep |
Details | – | P5-C3 | Pores R7.3-R7.3 70 bps 6mer | BssSI |
Read Length N50 (kb) | 0.1 | 9.681 | 9.934 | 132.613 |
Mean Read Length (kb) | 0.1 | 6.607 | 5.883 | 62.531 |
Count | 301,513,554 | 1,949,427 | 532,714 | 1,628,681 |
Span (Gb) | 30.15 | 12.88 | 3.15 | 101.84 |
Coverage > 0 kb | 103.26 | 44.11 | 10.77 | 348.78 |
> 20 kb | 0 | 1.28 | 2.91 | 330.22 |
> 30 kb | 0 | 0.01 | 1.72 | 323.31 |
> 50 kb | 0 | 0 | 0.71 | 303.02 |
> 100 kb | 0 | 0 | 0.28 | 226.1 |
> 150 kb | 0 | 0 | 0.2 | 148.5 |