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Table 1 Genome sequencing datasets for Sciara coprophila

From: High contiguity de novo genome assembly and DNA modification analyses for the fungus fly, Sciara coprophila, using single-molecule sequencing

  Illumina HiSeq 2000 PacBio RSII Oxford Nanopore MinION MkI BioNano Genomics Irys
Source Male Embryos Male Embryos Male Embryosa Male pupae
Library Paired-Enda SMRTBell MAP002-006 (2D) IrysPrep
Details P5-C3 Pores R7.3-R7.3 70 bps 6mer BssSI
Read Length N50 (kb) 0.1 9.681 9.934 132.613
Mean Read Length (kb) 0.1 6.607 5.883 62.531
Count 301,513,554 1,949,427 532,714 1,628,681
Span (Gb) 30.15 12.88 3.15 101.84
Coverage > 0 kb 103.26 44.11 10.77 348.78
> 20 kb 0 1.28 2.91 330.22
> 30 kb 0 0.01 1.72 323.31
> 50 kb 0 0 0.71 303.02
> 100 kb 0 0 0.28 226.1
> 150 kb 0 0 0.2 148.5
  1. aA minority of the Nanopore data came from male adults (see Methods)