| |
Illumina HiSeq 2000
|
PacBio RSII
|
Oxford Nanopore MinION MkI
|
BioNano Genomics Irys
|
|---|
|
Source
|
Male Embryos
|
Male Embryos
|
Male Embryosa
|
Male pupae
|
|
Library
|
Paired-Enda
|
SMRTBell
|
MAP002-006 (2D)
|
IrysPrep
|
|
Details
|
–
|
P5-C3
|
Pores R7.3-R7.3 70 bps 6mer
|
BssSI
|
|
Read Length N50 (kb)
|
0.1
|
9.681
|
9.934
|
132.613
|
|
Mean Read Length (kb)
|
0.1
|
6.607
|
5.883
|
62.531
|
|
Count
|
301,513,554
|
1,949,427
|
532,714
|
1,628,681
|
|
Span (Gb)
|
30.15
|
12.88
|
3.15
|
101.84
|
|
Coverage > 0 kb
|
103.26
|
44.11
|
10.77
|
348.78
|
|
> 20 kb
|
0
|
1.28
|
2.91
|
330.22
|
|
> 30 kb
|
0
|
0.01
|
1.72
|
323.31
|
|
> 50 kb
|
0
|
0
|
0.71
|
303.02
|
|
> 100 kb
|
0
|
0
|
0.28
|
226.1
|
|
> 150 kb
|
0
|
0
|
0.2
|
148.5
|
- aA minority of the Nanopore data came from male adults (see Methods)
