Fig. 1From: Choice of pre-processing pipeline influences clustering quality of scRNA-seq datasetsAlignment results of all datasets (Table 1) run with either Cell Ranger or kallisto against Ensembl reference. a Percent alignment rates of reads against the reference transcriptome. b Total gene detection. c Median gene counts over all cells per dataset. d Median UMI counts over all cells per dataset. e Total cell counts of each datasetBack to article page