Table 1 Comparison of complete chloroplast genome features of 12 subg. Amygdalus species
Species | Genome (bp) | LSC length (bp) | SSC length (bp) | IR length (bp) | Number of PCGs | Number of tRNAs genes (bp) | Number of rRNAs genes (bp) | GC content (%) | GC content in LSC (%) | GC content in SSC (%) | GC content in IR (%) | Accession number |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
P. kansuensis | 157,736 | 85,757 | 19,133 | 26,380 | 86 (8) | 37 (7) | 8 (4) | 36.8 | 34.6 | 30.3 | 42.6 | NC023956 |
P. persica | 157,790 | 85,882 | 19,060 | 26,467 | 86 (8) | 37 (7) | 8 (4) | 36.8 | 34.6 | 30.4 | 42.6 | HQ336405 |
P. pedunculate | 157,851 | 86,052 | 19,029 | 26,385 | 86 (7) | 37 (7) | 8 (4) | 36.8 | 34.6 | 30.4 | 42.6 | MG602257 |
P. davidiana | 158,971 | 86,607 | 19,027 | 26,381 | 86(7) | 37(7) | 8(4) | 36.7 | 34.6 | 30.4 | 42.6 | MK798145 |
P. dulcis | 158,085 | 86,322 | 19,070 | 26,137 | 86(7) | 37(7) | 8(4) | 36.8 | 34.6 | 30.5 | 42.7 | MT019559 |
P. tangutica | 158,166 | 86,146 | 19,040 | 26,386 | 86 (9) | 37 (7) | 8 (4) | 36.8 | 34.6 | 30.5 | 42.6 | MK780039 |
P. mira | 158,198 | 86,198 | 19,032 | 26,380 | 86 (8) | 37 (7) | 8 (4) | 36.8 | 34.6 | 30.3 | 42.5 | MK798147 |
P. davidiana var. potaninii Rehd. | 158,361 | 86,488 | 19,133 | 26,371 | 86 (9) | 37 (7) | 8 (4) | 36.8 | 34.5 | 30.4 | 42.6 | MT019558 |
P. ferganensis | 158,365 | 86,471 | 19,008 | 26,386 | 86 (9) | 37 (7) | 8 (4) | 36.8 | 34.7 | 30.5 | 42.6 | MK798146 |
P. mongolica | 158,039 | 86,173 | 19,084 | 26,391 | 86(7) | 37(7) | 8(4) | 36.7 | 34.6 | 30.3 | 42.6 | NC037849 |
P. triloba | 158,455 | 86,422 | 19,031 | 26,317 | 86 (9) | 37(7) | 8(4) | 36.8 | 34.6 | 30.5 | 42.7 | MK790138 |
P. tenella | 158,596 | 86,608 | 19,020 | 26,404 | 86 (8) | 37 (7) | 8 (4) | 36.7 | 34.6 | 30.3 | 42.6 | MK764428 |