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Table 4 High-confidence mappings with genomes of Miscanthus sinensis and other four closely related plant species

From: Unveiling the transcriptomic complexity of Miscanthus sinensis using a combination of PacBio long read- and Illumina short read sequencing platforms

Data type Oryza sativa Zea mays Sorghum bicolor Saccharum Spontaneum L Miscanthus sinensis
PacBio B0605 FLNCs 210,330 (35.23 %) 463,741 (77.67 %) 478,942 (80.22 %) 557,818 (93.43 %) 593,760 (99.45 %)
PacBio C0542 FLNCs 203,587 (34.92 %) 450,169 (77.20 %) 464,189 (79.61 %) 545,601 (93.57 %) 581,923 (99.80 %)
Illumina B0605-1 Clean reads 330,754 (0.7 %) 6380,120 (13.5 %) 14,542,559 (30.7 %) 21,550,628 (45.6 %) 40,558,657 (85.82 %)
Illumina B0605-2 Clean reads 269,976 (0.6 %) 5,476,174 (12.9 %) 13,253,089 (31.1 %) 19,582,421 (46.0 %) 36,776,636 (86.39 %)
Illumina C0542-1 Clean reads 331,302 (0.8 %) 5,896,040 (13.8 %) 13,689,017 (31.9 %) 20,256,499 (47.3 %) 37,048,408 (86.51 %)
Illumina C0542-2 Clean reads 313,718 (0.7 %) 5,466,749 (12.3 %) 14,044,656 (31.6 %) 20,917,089 (47.0 %) 38,727,765 (87.02 %)
All transcripts 41,125 (10.06 %) 196,184 (47.99 %) 255,460 (62.49 %) 325,896 (79.72 %) 395,065 (96.64 %)
  1. Values in brackets shows mapping ratios between two datasets