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Table 3 Recombination events predicted by RDP4 in the full genomes of the 22 APV1 isolates

From: Genomic diversity of Areca Palm Velarivirus 1 (APV1) in Areca palm (Areca catechu) plantations in Hainan, China

Event No. Recombination Major parent Minor parent Detection methods
R G B M C S T
1 LSGP1–1 BTZL1 Unknown (WNLG1) + +
2 LSGP1–2 LSGP1–1 Unknown (WNXL1–2) + + + +
3 LSGP1–3 WNY LSGP1–1 + + +
4 LSGP1–3 Unknown (TCFM1) BTY + +
5 LSGP1–3 WNY BTY + + + + + +
6 LSGP2 WNXL1–1 QHZY1 + + + +
7 QHDH4 QHZY1 QHDH1 + +
8 QHZY1 LSGP2 Unknown (QHDH1) + +
9 TCFM1 BTZL1 WNY + + +
10 WNCF1–1 WNXL1–1 Unknown (QHZY1) + +
11 WNCF1–2 WNCF1–3 BTY + + + + + +
12 WNCF1–3 WNY LSGP2 + + + + + +
13 WNCF1–3 Unknown (WNLG1) WNCF1–1 + + + +
14 WNCF1–3 WNY WNXL1–1 + + + +
15 WNCF1–3 WNY WNXL1–1 + + + +
16 WNSG1 LDTT1 BTZL1 + + +
17 WNXL1–2 WNY WNXL1–1 + +
18 WNXL1–2 Unknown (TCFM1) WNXL1–1 + + +
19 WNXL1–2 Unknown (QHDH1) WNXL1–1 + +
20 WNXL1–2 WNY LSGP2 + + + + + +