Table 1 Quality metrics for the present assembly when compared with previous donkey genome assemblies
| Â | This study (improved DNA Zoo, ASM130575v2) | Huang et al. [31] (ASM130575v1) | Renaud et al. [12] |
|---|---|---|---|
N50 contigs | 66.7 kb | 66.7 kb | 140.3 kb |
N50 scaffolds | 95.5 Mb | 3.8 Mb | 15.4 Mb |
Total bases | 2.391Gb | 2.391 Gb | 2.320 Gb |
Largest scaffold | 185.41 Mb | 17.06 Mb | 84.20 Mb |
Unresolved bases per 100 kb | 1396.07 | 1384.93 | 1121.61 |
Total number of predicted protein-coding genes | 18,937 | 23,850 | 18,984 |