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Table 1 Quality metrics for the present assembly when compared with previous donkey genome assemblies

From: Genome collinearity analysis illuminates the evolution of donkey chromosome 1 and horse chromosome 5 in perissodactyls: A comparative study

  This study (improved DNA Zoo, ASM130575v2) Huang et al. [31] (ASM130575v1) Renaud et al. [12]
N50 contigs 66.7 kb 66.7 kb 140.3 kb
N50 scaffolds 95.5 Mb 3.8 Mb 15.4 Mb
Total bases 2.391Gb 2.391 Gb 2.320 Gb
Largest scaffold 185.41 Mb 17.06 Mb 84.20 Mb
Unresolved bases per 100 kb 1396.07 1384.93 1121.61
Total number of predicted protein-coding genes 18,937 23,850 18,984