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Table 1 Illumina sequencing data and results of de novo assembly

From: Morphological characteristics and transcriptome analysis at different anther development stages of the male sterile mutant MS7–2 in Wucai (Brassica campestris L.)

Sample

Total reads

Q30

GC content

Total mapped

Multiple mapped

Uniquely mapped

MF_a1

47,261,182

94.58%

46.16%

42,249,106(89.39%)

1,153,287(2.44%)

41,095,819(86.95%)

MF_a2

39,720,798

94.66%

45.89%

35,440,440(89.22%)

958,474(2.41%)

34,481,966(86.81%)

MF_a3

39,605,112

94.49%

46.22%

35,190,113(88.85%)

978,840(2.47%)

34,211,273(86.38%)

MF_c1

52,506,816

94.85%

45.93%

47,180,496(89.86%)

1,282,201(2.44%)

45,898,295(87.41%)

MF_c2

43,897,316

94.49%

45.89%

39,425,100(89.81%)

1,041,897(2.37%)

38,383,203(87.44%)

MF_c3

47,741,050

94.51%

45.56%

42,769,446(89.59%)

1,103,699(2.31%)

41,665,747(87.27%)

MF_e1

51,530,136

94.55%

45.43%

46,108,970(89.48%)

1,219,597(2.37%)

44,889,373(87.11%)

MF_e2

48,881,998

94.42%

45.39%

43,747,842(89.50%)

1,189,445(2.43%)

42,558,397(87.06%)

MF_e3

49,059,912

94.56%

45.46%

43,936,829(89.56%)

1,146,466(2.34%)

42,790,363(87.22%)

MS_a1

46,995,876

94.69%

46.28%

41,910,271(89.18%)

1,180,814(2.51%)

40,729,457(86.67%)

MS_a2

50,035,570

94.63%

46.47%

44,747,784(89.43%)

1,221,996(2.44%)

43,525,788(86.99%)

MS_a3

40,922,432

94.77%

46.46%

36,570,701(89.37%)

998,232(2.44%)

35,572,469(86.93%)

MS_c1

45,571,650

94.51%

46.30%

40,751,380(89.42%)

1,149,356(2.52%)

39,602,024(86.90%)

MS_c2

50,301,580

95.16%

46.44%

45,059,996(89.58%)

1,253,441(2.49%)

43,806,555(87.09%)

MS_c3

48,264,128

94.40%

46.16%

43,156,288(89.42%)

1,224,968(2.54%)

41,931,320(86.88%)

MS_e1

46,593,432

94.54%

45.98%

41,571,814(89.22%)

1,047,534(2.25%)

40,524,280(86.97%)

MS_e2

49,135,418

94.52%

45.94%

43,920,962(89.39%)

1,110,749(2.26%)

42,810,213(87.13%)

MS_e3

48,188,776

94.63%

46.21%

42,986,555(89.20%)

1,141,293(2.37%)

41,845,262(86.84%)

Total

846,213,182

94.61%

46.01%

756,724,093(89.42%)

20,402,289(2.41%)

736,321,804(87.00%)