Table 4 Mating-type and MAT gene position of the analyzed A. niger strains. 48 A. niger strains have been analyzed in respect to their MAT locus configuration. Newly sequenced A. niger isolates and CBS 554.65 are reported in rows above the dashed line. Among these, 12 have a MAT1–1 and 13 a MAT1–2 locus. Previously sequenced A. niger strains are reported in rows below the dashed line. Among these, a bias towards MAT1–1 strains is present. All the MAT1–1 strain have a flipped orientation of the MAT locus and all the MAT1–2 strains a conserved one. *MAT locus distributed over multiple scaffolds which could not be combined
From: Genome sequencing of the neotype strain CBS 554.65 reveals the MAT1–2 locus of Aspergillus niger
MAT1–1 | MAT1–2 | ||||||
|---|---|---|---|---|---|---|---|
A. niger strain | Isolation source | MAT position | GenBank accession | A. niger strain | Isolation source | MAT position | GenBank accession |
CBS 112.32 | Unknown, Japan | flipped | MW809488 | CBS 554.65 | Tannin-gallic acid fermentation, USA | conserved | PRJNA715116 |
CBS 147371 | Green coffee bean, India | flipped | MW809493 | CBS 113.50 | Leather, unknown | conserved | MW809487 |
CBS 147320 | Grape, Australia | flipped | MW809494 | CBS 124.48 | Unknown | conserved | MW809489 |
CBS 147345 | Unknown, USA | flipped | MW809501 | CBS 118.52 | Unknown | conserved | Incomplete coverage* |
CBS 147347 | Petridish, soft drink factory, The Netherlands | flipped | MW809503 | CBS 147321 | Arctic soil, Norway | conserved | MW809495 |
CBS 769.97 | Leather, Unknown | flipped | MW809504 | CBS 147322 | Coffee, Brazil | conserved | MW809496 |
CBS 115989 | Unknown | flipped | MW809505 | CBS 147323 | Raisin, Turkey | conserved | MW809497 |
CBS 147352 | Air next to bottle blower, Mexico | flipped | MW809506 | CBS 147324 | Unknown | conserved | MW809498 |
CBS 147353 | Food factory of Sanquinetto, Italy | flipped | MW809507 | CBS 147482 | Surface water, Portugal | conserved | Incomplete coverage* |
CBS 115988 | Unknown | flipped | MW809491 | CBS 147344 | Coffee beans, Thailand | conserved | MW809499 |
CBS 131.52 | Leather, unknown | flipped | MW809490 | CBS 133816 | Black pepper, Denmark | conserved | MW809500 |
CBS 147343 | Coffee bean, Thailand | flipped | MW809508 | CBS 147346 | CF patient material, The Netherlands | conserved | MW809502 |
H915–1 | Soil, China | flipped | PRJNA288269 | CBS 630.78 | Army equipment, South Pacific Islands | conserved | MW809492 |
L2 | Soil, China | flipped | PRJNA288269 | RAF106 | Pu′er tea, China | conserved | PRJNA503751 |
LDM3 | Industrial production, China | flipped | PRJNA562509 | 3.316 | Laboratory, China | conserved | PRJNA597564 |
FDAARGOS_311 | USA | flipped | PRJNA231221 | An76 | Soil, China | conserved | PRJDB4313 |
N402 (ATCC 64974) | Laboratory, The Netherlands | flipped | PRJEB21769 | JSC-093350089 | ISS environmental surface, USA | conserved | PRJNA355122 |
ATCC 10864 | Soil, Peru | flipped | PRJNA300350 | MOD1-FUNGI2 | Red seedless grapes, USA | Genes in different scaffolds | PRJNA482816 |
F3_1F3_F | ISS environmental surface, USA | flipped | PRJNA667181 | ||||
F3_4F2_F | ISS environmental surface, USA | flipped | PRJNA667181 | ||||
F3_4F1_F | ISS environmental surface, USA | flipped | PRJNA667181 | ||||
DSM 1957 | Soil, France | flipped | PRJNA566102 | ||||
FGSC A1279 | Laboratory, The Netherlands | flipped | PRJNA255851 | ||||
A1 | Soil, China | flipped | PRJNA288269 | ||||
ATCC 1015 | USA | flipped | PRJNA15785 | ||||
ATCC 13496 | Soil, USA | flipped | PRJNA209543 | ||||
CBS 101883 (A. lacticoffeatus) | Coffee beans, Sumatra | flipped | PRJNA479910 | ||||
CBS 513.88 | Unknown | flipped | PRJNA19275 | ||||
SH-2 | Soil, China | flipped | PRJNA196564 | ||||
ATCC 13157 (A. phoenicis) | Whole shelled corn | flipped | PRJNA209548 | ||||