Transcriptome profiling of Malus sieversii under freezing stress after being cold-acclimated

Zhou, Ping; Li, Xiaoshuang; Liu, Xiaojie; Wen, Xuejing; Zhang, Yan; Zhang, Daoyuan

doi:10.1186/s12864-021-07998-0

BMC Genomics

Table 2 Freezing-responsive DETs involved in photosynthesis in M. Seversii

From: Transcriptome profiling of Malus sieversii under freezing stress after being cold-acclimated

KEGG ID	Gene_ID	Annotation	Log₂FC 0 h vs CK	Log₂FC 1 h vs CK	Log₂FC 6 h vs CK	Log₂FC 10 h vs CK
K02701	MD01G1004300	photosystem I reaction center subunit N	−2.4191	−1.8425	− 1.6728	− 1.6678
K02695	MD17G1191200	photosystem I reaction center subunit VI	−2.5274	−2.2878	− 2.1296	−2.0659
K02695	MD09G1209500	photosystem I reaction center subunit VI	−1.6946	− 1.5407	− 1.3918	−1.2528
K02695	MD17G1191400	photosystem I reaction center subunit VI	−2.1974	− 2.0681	− 1.9622	−1.9178
K02692	MD13G1191300	photosystem I reaction center subunit II	−1.7756	− 1.7049	− 1.508	−1.4809
K08905	MD03G1042800	photosystem I reaction center subunit V	−1.7683	−1.5376	− 1.3845	−1.2196
K02694	MD10G1238800	photosystem I reaction center subunit III	−2.0254	−1.8472	− 1.6623	− 1.4185
K02692	MD16G1191400	photosystem I reaction center subunit II	−2.401	− 2.349	− 2.0606	−1.9346
K02694	MD05G1259200	photosystem I reaction center subunit III	−1.3697	−1.4181	− 1.3319	−1.1084
K02698	MD05G1276100	photosystem I reaction center subunit psaK	−2.9286	−3.6163	− 3.1435	− 2.9163
K02641	MD02G1130800	ferredoxin	−1.9304	− 1.7868	− 1.7782	−1.5045
K02641	MD02G1130800_novel01	ferredoxin	−1.83335	− 1.77998	− 1.72846	−1.83335
K14332	MD03G1150500	photosystem I subunit O	−2.0745	−1.9282	−1.6151	− 1.5103
K14332	MD03G1150500_novel01	photosystem I subunit O	−1.889	− 1.81609	− 1.56587	− 1.43579
K02115	MD05G1347300	ATP synthase gamma chain	−1.1495	−1.232	− 1.2582	−1.0038
K02113	MD17G1003000	ATP synthase subunit delta	−1.5733	−1.6869	− 1.5763	−1.5271
K02723	MD06G1160500	photosystem II core complex proteins psbY	3.8231	3.6315	3.5436	3.5162
K02717	MD17G1132900	photosystem II oxygen-evolving enhancer protein 2	−1.6332	−1.4713	−1.3362	− 1.0575
K02717	MD07G1190900	photosystem II oxygen-evolving enhancer protein 2	−1.1908	−1.4006	− 1.2204	−1.1741
K02717	MD07G1191200	photosystem II oxygen-evolving enhancer protein 2	−1.0559	−1.4264	− 1.5194	−1.1525
K08901	MD10G1311700	photosystem II oxygen-evolving enhancer protein 3	−2.6605	−2.2329	−1.9441	−1.5594
K08901	MD11G1227900	photosystem II oxygen-evolving enhancer protein 3	−1.5407	−2.1963	−2.0574	− 2.0248
K02717	MD09G1146300	photosystem II oxygen-evolving enhancer protein 2	−1.9933	−1.695	− 1.4987	−1.2512
K08903	MD10G1176000	photosystem II reaction center PSB28 protein	1.3279	1.131	1.0186	1.2959
K02721	MD10G1192100	photosystem II PsbW protein	−1.5838	−1.391	−1.1383	− 1.2135
K02723	MD16G1106800	photosystem II PsbY protein	−2.5193	−3.2396	−2.8513	− 2.5848
K02723	MD16G1106800_novel01	photosystem II PsbY protein	−2.46007	−3.08437	−2.69523	− 2.62407
K02723	MD13G1106700	photosystem II PsbY protein	−2.2263	−2.213	−1.893	−1.9343
K02723	MD13G1106700_novel01	photosystem II PsbY protein	−2.15847	−2.15399	−1.832	−1.95485
K02636	MD09G1098300	cytochrome b6-f complex iron-sulfur subunit	−2.1886	−2.0483	− 2.0024	−1.8187
K02636	MD09G1098300_novel02	cytochrome b6-f complex iron-sulfur subunit	−2.30428	−2.11278	− 2.15924	−2.02768
K02638	MD15G1006300	plastocyanin	−1.6645	−1.5692	− 1.3261	−1.1126

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ISSN: 1471-2164

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