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Table 6 SSR marker of all tissues specific DEGs

From: Revelation of candidate genes and molecular mechanism of reproductive seasonality in female rohu (Labeo rohita Ham.) by RNA sequencing

 

IGA [BR] vs. PSR [BR]

IGA [PIT] vs. PSR [PIT]

IGA [OVA] vs. PSR [OVA]

IGA [LIV] vs. PSR [LIV]

Sequences examined

35,840

21,767

31,097

14,558

Identified SSRs

19,633

12,899

16,461

8874

SSR containing sequences

13,602

8784

11,385

5979

Sequences containing more than one SSR

4209

2837

3520

1975

SSRs present in compound formation

1202

741

997

526

Mono-

11,173

7498

9735

5492

Di-

5717

3603

4465

2174

Tri-

2319

1563

1975

1075

Tetra-

406

221

269

123

Penta-

12

7

10

5

Hexa-

6

7

7

5