Table 1 Summary of sequencing data quality preprocessing results
Sample | raw reads | raw bases | clean reads | clean bases | valid bases | Q30 | GC |
|---|---|---|---|---|---|---|---|
HX1_1 | 48.04 M | 7.21G | 44.96 M | 6.56G | 91.01% | 89.68% | 49.37% |
HX1_2 | 50.71 M | 7.61G | 46.96 M | 6.81G | 89.52% | 88.96% | 50.02% |
HX1_3 | 49.53 M | 7.43G | 46.19 M | 6.71G | 90.25% | 89.45% | 49.25% |
HX1_4 | 48.01 M | 7.20G | 44.89 M | 6.57G | 91.17% | 89.28% | 49.53% |
ZZ1_1 | 51.12 M | 7.67G | 47.92 M | 7.00G | 91.25% | 89.85% | 48.76% |
ZZ1_2 | 52.71 M | 7.91G | 49.40 M | 7.19G | 90.95% | 89.93% | 48.94% |
ZZ1_3 | 47.44 M | 7.12G | 44.52 M | 6.49G | 91.15% | 90.04% | 49.10% |
ZZ1_4 | 51.21 M | 7.68G | 48.17 M | 7.05G | 91.79% | 89.93% | 49.00% |