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Fig. 1 | BMC Genomics

Fig. 1

From: Comprehensive genome-wide analysis of calmodulin-binding transcription activator (CAMTA) in Durio zibethinus and identification of fruit ripening-associated DzCAMTAs

Fig. 1

Domain, gene and motif organization for 10 DzCAMTAs. (A) Schematic representation of functional domains of 10 putative DzCAMTAs. Bioinformatics analysis of functional conserved domains was performed by CD search, and searches in Pfam, and InterPro databases. CaMBD was searched in Calmodulin Target Database. NLS was specifically searched in NLS mapper and Motif Scan databases. The domain structure for 10 putative DzCAMTAs was drawn using Illustrator for Biological Sequences software. (B) Phylogenetic tree of 10 putative DzCAMTAs constructed with ML method using 1000 bootstrap value. (C) Schematic representation of the exon and intron organization of 10 putative DzCAMTA genes. The red boxes represent the exons, the black lines represent the introns, and the blue boxes represent the upstream and downstream regions. (D) The conserved protein motifs in the 10 putative DzCAMTAs. Each motif is represented with a specific color

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