Skip to main content

Table 4 List of overlapped genomic regions detected by iHS and ROH

From: Genome-wide selection signatures detection in Shanghai Holstein cattle population identified genes related to adaption, health and reproduction traits

iHS candidate regions

ROH candidate regions

Genes in regions

Chr

Start (bp)

End (bp)

Mean |iHS| Value

Chr

Start (bp)

End (bp)

Length

SNPs

12

32,000,000

32,500,000

1.65

12

30,773,910

33,562,640

2,788,730

117

MTIF3、LNX2、USP12、POLR1D、GTF3A、GSX1、RPL21

13

40,000,000

40,500,000

2.67

13

39,852,457

41,196,648

1,344,191

120

KIZ

21

63,000,000

63,500,000

2.00

21

61,326,146

64,094,599

2,768,453

103

——

23

28,000,000

28,500,000

2.18

23

27,948,371

29,204,475

1,256,104

85

MIR12033、OR12D2、UBD