Table 3 DNA modification summary by Megalodon
> 1% methylation | > 5% methylation | Coverage | |||||||
|---|---|---|---|---|---|---|---|---|---|
Total Sites | 1st run | 2nd run | # replicated | 1st run | 2nd run | # replicated | 1st run | 2nd run | |
5mC CpG | 642 | 11 | 13 | 0 | 2 | 2 | 0 | 43x | 63x |
5hmC CpG | 642 | 328 | 309 | 196 | 124 | 67 | 44 | 43x | 63x |
5mC CH | 5469 | 0 | 0 | 0 | 0 | 0 | 0 | 49x | 73x |
5hmC CH | 5469 | 183 | 189 | 18 | 4 | 0 | 0 | 49x | 73x |