Table 1 lncRNA data integration results
From: Data integration and evolutionary analysis of long non-coding RNAs in 25 flowering plants
Species | GREENC | CANTATADB | RefSeq | NONCODE | Number of lncRNAs collected | Number of unique lncRNAs |
|---|---|---|---|---|---|---|
Amborella trichopoda | 5698 | 5511 | 4750 | 0 | 15,959 | 7074 |
Arabidopsis lyrata | 4363 | 7593 | 5311 | 0 | 17,267 | 9363 |
Arabidopsis thaliana | 3008 | 4373 | 4083 | 3763 | 15,227 | 5539 |
Brachypodium distachyon | 5584 | 4945 | 8779 | 0 | 19,308 | 6783 |
Brassica napus | 0 | 12,010 | 18,114 | 0 | 30,124 | 16,597 |
Brassica rapa | 0 | 8501 | 10,102 | 0 | 18,603 | 10,797 |
Citrus sinensis | 2562 | 0 | 6581 | 0 | 9143 | 3430 |
Cucumis sativus | 1929 | 7348 | 1639 | 0 | 10,916 | 5466 |
Fragaria vesca | 3503 | 0 | 5007 | 0 | 8510 | 3889 |
Glycine max | 6689 | 3096 | 10,980 | 0 | 20,765 | 8817 |
Gossypium raimondii | 4216 | 0 | 12,765 | 0 | 16,981 | 6422 |
Malus domestica | 4126 | 10,924 | 11,608 | 0 | 26,658 | 9228 |
Manihot esculenta | 3468 | 9504 | 4874 | 0 | 17,846 | 7660 |
Medicago truncatula | 9676 | 3590 | 3874 | 0 | 17,140 | 10,904 |
Musa acuminata | 4071 | 3001 | 5428 | 0 | 12,500 | 5121 |
Oryza brachyantha | 0 | 6004 | 2720 | 0 | 8724 | 4926 |
Oryza sativa | 5237 | 2788 | 10,090 | 0 | 18,115 | 7211 |
Populus trichocarpa | 5569 | 4322 | 0 | 0 | 9891 | 8334 |
Prunus persica | 3301 | 2902 | 7274 | 0 | 13,477 | 4183 |
Solanum lycopersicum | 3440 | 4716 | 2203 | 0 | 10,359 | 6807 |
Solanum tuberosum | 6680 | 5790 | 7727 | 0 | 20,197 | 7797 |
Sorghum bicolor | 5305 | 2600 | 4821 | 0 | 12,726 | 6326 |
Theobroma cacao | 4268 | 5256 | 9026 | 0 | 18,550 | 7459 |
Vitis vinifera | 2526 | 4542 | 5340 | 0 | 12,408 | 6151 |
Zea mays | 18,110 | 10,761 | 11,543 | 0 | 40,414 | 23,512 |