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Fig. 6 | BMC Genomics

Fig. 6

From: Transcriptomic analysis of the Myxococcus xanthus FruA regulon, and comparative developmental transcriptomic analysis of two fruiting body forming species, Myxococcus xanthus and Myxococcus stipitatus

Fig. 6

Many genes are differentially regulated between M. stipitatus cells grown in ctrl and MD1 media. RNA from M. stipitatus was isolated and was sequenced and analyzed as described for M. xanthus. A MAplots were generated using DEseq and data were apeglm transformed. Red points are those with an adjusted P-value of ≤0.01, and triangles represent genes with log2 fold changes greater than the values on the Y axis. B Bar graphs indicate the numbers of genes that show statistically significantly increased expression in the earlier timepoint or control condition (yellow) and increased expression at the later timepoint (blue) with color intensity representing the degree of regulation based on log2 fold changes. Volcano plots (C) were generated for using the “Enhanced volcano” R package, and points in red have log2 fold changes of ≤ − 2 or ≥ 2, and p-values of ≤1 × 10− 3

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BMC Genomics

ISSN: 1471-2164

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