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Table 3 Candidate genes identified by runs of homozygosity (ROH) test under evidence of positive signature of selection in the Brazilian Mangalarga Marchador horses

From: Genome-wide scans for signatures of selection in Mangalarga Marchador horses using high-throughput SNP genotyping

Ensembl Gene ID Chr Start position End Position Genes Description
ENSECAG00000010114 1 149,706,774 149,775,059 RASGRP1 RAS guanyl releasing protein 1
ENSECAG00000003634 6 30,832,832 30,834,614 RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1
ENSECAG00000005303 6 30,883,302 30,896,118 TULP3 tubby like protein 3
ENSECAG00000009337 6 31,002,891 31,197,638 TSPAN9 tetraspanin 9
ENSECAG00000010144 6 30,609,983 30,638,725 DDX11 DEAD/H-box helicase 11
ENSECAG00000010693 6 30,781,746 30,790,420 ITFG2 integrin alpha FG-GAP repeat containing 2
ENSECAG00000011303 6 30,931,802 30,968,566 TEAD4 TEA domain transcription factor 4
ENSECAG00000013410 6 30,360,399 30,398,526 SLC6A13 solute carrier family 6 member 13
ENSECAG00000018082 6 30,792,657 30,799,176 NRIP2 nuclear receptor interacting protein 2
ENSECAG00000018777 6 30,810,694 30,816,253 TEX52 testis expressed 52
ENSECAG00000019129 6 30,817,902 30,826,537 FOXM1 forkhead box M1
ENSECAG00000019283 6 30,595,381 30,608,852 WASHC1 WASH complex subunit 1
ENSECAG00000020465 6 30,769,282 30,775,457 FKBP4 FK506 binding protein 4
ENSECAG00000005017 7 45,641,390 45,646,041 FBXW9 F-box and WD repeat domain containing 9
ENSECAG00000008886 7 45,647,009 45,647,307 GNG14 G protein subunit gamma 14
ENSECAG00000009177 7 45,651,702 45,655,097 DHPS deoxyhypusine synthase
ENSECAG00000012154 7 45,617,437 45,620,601 TRIR telomerase RNA component interacting RNase
ENSECAG00000013673 7 45,626,599 45,637,845 TNPO2 transportin 2
ENSECAG00000019788 7 45,655,144 45,658,885 WDR83 WD repeat domain 83
ENSECAG00000021981 7 45,659,262 45,660,408 WDR83OS WD repeat domain 83 opposite strand
ENSECAG00000003551 9 73,341,857 73,423,501 LRRC6 leucine rich repeat containing 6
ENSECAG00000012611 9 73,453,208 73,478,427 TMEM71 transmembrane protein 71
ENSECAG00000017467 9 72,950,611 72,999,460 KCNQ3 potassium voltage-gated channel subfamily Q member 3
ENSECAG00000002945 11 32,087,533 32,087,985 CCDC182 coiled-coil domain containing 182
ENSECAG00000011435 11 31,647,130 32,031,445 MSI2 musashi RNA binding protein 2
ENSECAG00000002212 17 18,615,804 18,617,704 FOXO1 forkhead box O1
ENSECAG00000003600 17 18,742,806 18,778,545 MRPS31 mitochondrial ribosomal protein S31
ENSECAG00000002357 23 50,540,041 50,540,532 RPP25L ribonuclease P/MRP subunit p25 like
ENSECAG00000004839 23 50,465,243 50,465,473 ENHO Equus caballus energy homeostasis associated (ENHO), mRNA
ENSECAG00000006176 23 50,484,877 50,502,709 CNTFR ciliary neurotrophic factor receptor
ENSECAG00000008176 23 50,568,433 50,571,634 GALT galactose-1-phosphate uridylyltransferase
ENSECAG00000011566 23 50,345,688 50,359,034 C9orf24 chromosome 9 open reading frame 24
ENSECAG00000012578 23 50,362,111 50,367,137 FAM219A family with sequence similarity 219 member A
ENSECAG00000013178 23 50,543,087 50,549,476 DCTN3 dynactin subunit 3
ENSECAG00000013412 23 50,605,846 50,607,075 CCL19 C-C motif chemokine ligand 19
ENSECAG00000016961 23 50,426,532 50,464,571 DNAI1 dynein axonemal intermediate chain 1
ENSECAG00000017442 23 50,576,370 50,582,294 IL11RA interleukin 11 receptor subunit alpha
ENSECAG00000019783 23 50,562,602 50,564,385 SIGMAR1 sigma non-opioid intracellular receptor 1
Chr: Chromosomes