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Table 1 Number of DEGs arising from each pairwise comparison. For each treatment condition and appropriate reference background, mock-treated (MT) or Fg challenged (Fg), the total number of DEGs are presented. DEGs are further subdivided based on mapping to the wheat or Fg genome and directionality of the expression changes (up-regulated or down-regulated)

From: Wheat transcriptome profiling reveals abscisic and gibberellic acid treatments regulate early-stage phytohormone defense signaling, cell wall fortification, and metabolic switches following Fusarium graminearum-challenge

 

Condition

DEG Population

Regulation

ABA/MT

GA/MT

Fg/MT

Fg + ABA/MT

Fg + AS6/MT

Fg + GA/MT

Fg + ABA/Fg

Fg + GA/Fg

Fg + AS6/Fg

Fg + AS6/Fg + ABA

Total

Up

2566

4623

8691

11772

7668

10560

2477

1703

3163

3602

Down

4098

4473

7100

7810

5962

5798

1213

2472

3325

3330

Wheat

Up

2566

4623

6855

8529

6410

5743

2398

806

3146

3602

Down

4098

4473

7100

7810

5962

5798

1213

2471

3299

2773

Fg

Up

0

0

1836

3243

1258

4817

79

897

17

0

Down

0

0

0

0

0

0

0

1

26

557