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Table 1 The characteristics of identified SBP genes in sugarcane

From: Genomic analysis of SBP gene family in Saccharum spontaneum reveals their association with vegetative and reproductive development

Transcript ID Name Chr Genome locations ORF Amino acids MW (kDa) pI GRAVY Group Subcellular localization
Sspon.001A0040480 SsSBP1–1 1A 108,429,474–108,435,971 2904 967 105.6349 5.45 −0.303 II Nuclear
Sspon.001D0044800 SsSBP1–2 1D 109,076,291–109,081,860 2697 898 98.0265 5.53 − 0.313 II Nuclear
Sspon.002A0013930 SsSBP2–1 2A 29,209,489–29,217,185 1644 547 57.0766 9.25 −0.244 VII Nuclear
Sspon.002B0011930 SsSBP2–2 2B 28,141,105–28,145,280 1329 442 45.9953 6.53 −0.343 VII Nuclear
Sspon.002D0010972 SsSBP2–3 2D 23,780,730–23,784,862 1227 408 42.4603 6.53 −0.354 VII Nuclear
Sspon.002A0015030 SsSBP3–1 2A 31,009,987–31,013,034 1179 392 40.9194 9.14 −0.477 VII Nuclear
Sspon.002B0012730 SsSBP3–2 2B 29,525,208–29,528,451 1191 396 41.2847 8.98 −0.462 VII Nuclear
Sspon.002C0016120 SsSBP3–3 2C 35,044,657–35,076,244 3195 1064 116.0996 7.94 −0.351 VII Nuclear
Sspon.002D0011720 SsSBP3–4 2D 25,045,205–25,048,503 1173 390 40.7902 9.04 −0.491 VII Nuclear
Sspon.002B0008220 SsSBP4–1 2B 20,690,286–20,695,232 1269 422 42.7577 9.68 −0.315 VI membrane
Sspon.002C0010600 SsSBP4–2 2C 22,401,265–22,403,347 576 191 19.3214 9.87 −0.399 VI Nuclear
Sspon.002D0015440 SsSBP4–3 2D 33,849,661–33,853,542 723 240 24.4241 10.32 −0.533 VI Nuclear
Sspon.002C0010571 SsSBP5 2C 22,345,677–22,347,101 570 189 19.3353 9.96 −0.564 VI Nuclear
Sspon.002D0015430 SsSBP6 2D 33,845,362–33,846,340 600 199 20.1822 9.96 −0.512 VI Nuclear
Sspon.003A0000410 SsSBP7–1 3A 1,071,412–1,075,547 1185 394 41.3121 9.15 −0.496 VII Nuclear
Sspon.003B0003860 SsSBP7–2 3B 7,790,347–7,793,952 1494 497 52.3230 8.94 −0.291 VII Nuclear
Sspon.003C0005960 SsSBP7–3 3C 11,433,782–11,437,627 1446 481 51.5591 9.57 −0.44 VII Nuclear
Sspon.003A0019770 SsSBP8 3A 50,439,706–50,445,244 2550 849 94.3843 6.22 −0.423 IV Nuclear
Sspon.003C0027810 SsSBP9 3C 70,928,512–70,931,044 2604 867 96.6721 7.81 −0.473 IV Nuclear
Sspon.004A0021810 SsSBP10–1 4A 62,618,391–62,622,079 768 255 27.6747 8.78 −0.693 V Nuclear
Sspon.004B0022500 SsSBP10–2 4B 66,878,517–66,882,065 1152 383 41.8795 8.67 −0.709 V Nuclear
Sspon.004A0023470 SsSBP11–1 4A 66,657,938–66,661,498 1458 485 51.7285 9.09 −0.557 V Nuclear
Sspon.004D0025580 SsSBP11–2 4D 76,179,579–76,181,404 1077 358 38.8064 9.36 −0.673 V Nuclear
Sspon.004A0023540 SsSBP12 4A 66,840,410–66,841,321 1422 473 50.3841 9.01 −0.551 V membrane
Sspon.004B0022100 SsSBP13 4B 66,160,113–66,162,260 894 297 31.0155 9.24 −0.16 III Nuclear
Sspon.004C0023650 SsSBP14 4C 72,419,102–72,423,304 1314 437 45.6945 7.63 −0.296 III Nuclear
Sspon.004D0023290 SsSBP15–1 4D 70,928,686–70,930,879 936 311 32.8608 9.53 −0.295 III Nuclear
Sspon.008B0005752 SsSBP15–2 8B 10,803,440–10,806,188 1263 420 44.4747 9.22 −0.588 III Nuclear
Sspon.008C0006030 SsSBP15–3 8C 13,386,438–13,389,568 1284 427 45.1796 9.23 −0.583 III Nuclear
Sspon.004D0028460 SsSBP16 4D 82,589,080–82,591,351 1260 419 45.7805 9.52 −0.608 V Nuclear
Sspon.005A0006871 SsSBP17–1 5A 17,014,877–17,018,085 1185 394 42.8134 7.47 −0.643 III Nuclear
Sspon.005D0002360 SsSBP17–2 5D 5,016,047–5,019,246 1191 396 42.8995 7.47 −0.641 III Nuclear
Sspon.005A0007540 SsSBP18–1 5A 18,447,549–18,450,470 1203 400 40.9130 9.50 −0.373 VII Nuclear
Sspon.005C0003700 SsSBP18–2 5C 9,553,547–9,557,033 1104 367 37.6902 9.48 −0.429 VII Nuclear
Sspon.005D0002370 SsSBP19 5D 5,036,183–5,040,905 1191 396 43.2850 7.42 −0.716 III Nuclear
Sspon.006A0002670 SsSBP20–1 6A 6,325,351–6,330,604 2856 951 104.3392 7.10 −0.354 II Nuclear
Sspon.006D0001140 SsSBP20–2 6D 3,638,437–3,642,110 2298 765 84.0087 8.79 −0.459 II Nuclear
Sspon.006A0003761 SsSBP21–1 6A 8,766,368–8,771,945 1410 469 48.7223 8.15 −0.456 VII Nuclear
Sspon.006D0002450 SsSBP21–2 6D 6,732,739–6,738,087 1419 472 49.8476 8.62 −0.479 VII Nuclear
Sspon.006A0018544 SsSBP22 6A 71,945,300–71,953,194 1065 354 37.6695 9.26 −0.173 VII Nuclear
Sspon.006A0019261 SsSBP23 6A 75,415,532–75,423,459 1005 334 35.1004 9.93 −0.328 VII Nuclear
Sspon.006B0001500 SsSBP24–1 6B 3,848,048–3,852,283 1248 415 43.1377 8.93 −0.627 VII Nuclear
Sspon.006C0001780 SsSBP24–2 6C 4,165,730–4,169,347 1251 416 42.8242 8.87 −0.621 VII Nuclear
Sspon.006D0000820 SsSBP24–3 6D 2,918,125–2,922,066 1236 411 42.5089 8.87 −0.627 VII Nuclear
Sspon.006C0002070 SsSBP25 6C 4,855,835–4,856,954 897 298 30.4877 9.80 −0.63 II Nuclear
Sspon.006D0002410 SsSBP26 6D 6,577,854–6,582,459 726 241 26.0042 8.71 −0.741 VII Nuclear
Sspon.007A0010700 SsSBP27 7A 22,289,512–22,304,260 1998 665 72.2692 5.37 −0.438 I Nuclear
Sspon.007A0010740 SsSBP28 7A 22,398,323–22,403,566 1311 436 47.2836 5.56 −0.463 I Nuclear
Sspon.008B0001960 SsSBP29 8B 2,868,989–2,873,212 1272 423 45.4750 9.32 −0.382 V Nuclear
Sspon.ctg0104090 SsSBP30 tig00011976 14–4187 1065 354 38.0538 9.30 −0.512 VII Nuclear