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Fig. 5 | BMC Genomics

Fig. 5

From: Integration of adeno-associated virus (AAV) into the genomes of most Thai and Mongolian liver cancer patients does not induce oncogenesis

Fig. 5

Comparison of AAV integrations into new Thai samples and published AAV integrations with respect to the AAV2 genome as the reference. In both panels, the X axis represents the base pair positions in the AAV2 reference genome and overlapping integrated segments are stacked on top of one another; there is no Y axis, but the number of rectangles stacked on top of one another indicate the number of overlapping integrations from that region of AAV. A Thirteen out of 17 Thai patients with samples subjected to viral capture sequencing had at least one integration of AAV. Ten had integrations only in the NT sample; two had integrations only in the T sample. Only one patient had a possibly clonal integration into the gene CCNA2. That integration, shown in maroon, is the only one that overlaps the X gene. B AAV intervals spanned by previously published integrations of AAV into liver cancer samples. The data for panel B are adapted from the supplementary information of reference 5; see also our Supplementary Table S3

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