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Table 2 Summary of genetic analysis between individual integral intensity, total integral intensity and degree of orientation

From: Genetic variations for the eggshell crystal structure revealed by genome-wide association study in chickens

Traits

A1

A2

A3

A4

A5

A6

A7

A8

A9

TA

OD

A1

0.05

(0.05)

0.22

(0.52)

0.94

(0.5)

0.63

(0.48)

NA

0.45

(0.48)

0.87

(0.42)

1.00

(0.66)

NA

0.87

(0.44)

0.41

(0.65)

A2

0.02

(0.03)

0.10

(0.05)

-0.50

(0.47)

0.46

(0.27)

0.17

(0.53)

1.00

(0.18)

0.59

(0.3)

0.73

(0.23)

0.36

(0.44)

0.90

(0.07)

NA

A3

0.09**

(0.03)

-0.05

(0.03)

0.06

(0.05)

0.68

(0.25)

0.83

(0.39)

-0.43

(0.38)

0.84

(0.22)

0.51

(0.36)

0.27

(0.53)

0.17

(0.33)

1.00

(0.47)

A4

0.07

(0.03)

0.07**

(0.03)

0.26**

(0.03)

0.21

(0.06)

0.84

(0.32)

0.07

(0.24)

0.80

(0.15)

0.74

(0.18)

0.45

(0.31)

0.71

(0.14)

0.56

(0.24)

A5

0.02

(0.03)

0

(0.03)

0.27**

(0.03)

0.17**

(0.03)

0.05

(0.05)

0.64

(0.53)

0.63

(0.35)

0.83

(0.34)

1.00

(0.84)

0.85

(0.38)

0.64

(0.5)

A6

0.07*

(0.03)

0.41**

(0.03)

-0.15**

(0.03)

0

(0.03)

-0.06

(0.03)

0.15

(0.05)

0.38

(0.25)

0.74

(0.21)

0.46

(0.37)

0.88

(0.11)

-0.88

(0.29)

A7

0.16**

(0.03)

-0.04

(0.03)

0.35**

(0.03)

0.32**

(0.03)

0.32**

(0.03)

-0.11**

(0.03)

0.24

(0.06)

0.75

(0.18)

0.61

(0.31)

0.79

(0.15)

0.44

(0.3)

A8

0.11*

(0.03)

0.29**

(0.03)

0.20**

(0.03)

0.29**

(0.03)

0.20**

(0.03)

0.23**

(0.03)

0.28**

(0.03)

0.15

(0.05)

0.94

(0.34)

0.94

(0.10)

0.06

(0.38)

A9

0.08*

(0.03)

0.10*

(0.03)

0.14**

(0.03)

0.20**

(0.03)

0.07*

(0.03)

0.13*

(0.03)

0.26**

(0.03)

0.31**

(0.03)

0.07

(0.05)

0.61

(0.31)

0.37

(0.51)

TA

0.15**

(0.03)

0.84**

(0.01)

0.25**

(0.03)

0.34**

(0.03)

0.31**

(0.03)

0.52**

(0.02)

0.26**

(0.03)

0.50**

(0.02)

0.31**

(0.03)

0.23

(0.06)

-0.12

(0.30)

OD

0.04

(0.03)

-0.78**

(0.02)

0.18**

(0.03)

0.52**

(0.02)

0.10**

(0.03)

-0.34**

(0.03)

0.23**

(0.03)

-0.04

(0.03)

0.03

(0.03)

-0.48**

(0.02)

0.06

(0.05)

  1. Lower triangle: phenotypic correlations; Diagonal: heritability estimates based on genome; Upper triangle: genetic correlations; Standard errors of the estimates are in parentheses; A1-A9 = integrate intensity of peaks of No. 1–9; TA = total intensity of all 9 peaks; OD = degree of orientation; *Significant linkage at P < 0.05. **Significant linkage at P < 0.01. NA: the genetic correlation value did not converge when we calculated the genetic correlation by the GCTA