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Fig. 5 | BMC Genomics

Fig. 5

From: Testing assembly strategies of Francisella tularensis genomes to infer an evolutionary conservation analysis of genomic structures

Fig. 5

Genome assemblies of FSC237 isolate based on different sequencing platforms and assemblers aligned to the SCHU S4 reference genome a) Canu b) Flye c) SPAdes and d) Unicycler. Assembled contigs from inside to outside: ONT+Ion Torrent, PacBio+Ion Torrent, ONT+MiSeq, PacBio+MiSeq, ONT+HiSeq, PacBio+HiSeq;  misassembled bases identified by QUAST (dark red); mismatches in total error (grey bars); outer circle: F. tularensis subsp. tularensis str. SCHU S4 reference, inner circle: F. tularensis subsp. tularensis str. SCHU S4 RefSeq genes (yellow) and pathogenicity islands (cyan bars) and ISFTu 1-6 (red/ purple/ blue bars), repeats (black) presented with Circos. The origin of replication is at twelve o’clocd

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