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Table 2 Hybrid assembly results for FSC237 isolate based on PacBio data

From: Testing assembly strategies of Francisella tularensis genomes to infer an evolutionary conservation analysis of genomic structures

Assembler Short read library Total length (bp) GC (%) Contigs (> = 500 bp) NGA50 (Mb) Genome covered (%) Genomic features (Complete + partial) Complete Busco (%) True/all circular contigs (size) Errors (per 100 kb)
Canu/ Pilon HiSeq 1,889,842 32.27 1 1.89 99.85 3794 + 3 part 93.92 0/0 4.34
MiSeq 1,889,606 32.27 1 1.89 99.85 3794 + 3 part 92.57 0/0 17.14
Ion Torrent 1,889,812 32.27 1 1.89 99.85 3794 + 3 part 93.24 0/0 5.82
Flye/Pilon HiSeq 1,892,761 32.26 2 1.50 100.00 3795 + 2 part 93.92 1/1 (1892709) 0.74
MiSeq 1,958,505 32.22 2 1.53 100.00 3796 + 1 part 92.57 1/1 (1892639) 23.78
Ion Torrent 1,958,909 32.22 2 1.53 100,00 3796 + 1 part 93.92 0/1 (393321) 28.16
SPAdes HiSeq 1,858,769 32.28 2 1.12 98.20 3736 + 3 part 93.92 0/1 (1499404) 0.16
MiSeq 1,830,140 32.33 29 0.09 96.69 3600 + 15 part 93.92 0/0 14.09
Ion Torrent 1,858,056 32.28 2 1.50 98.17 3738 + 1 part 92.57 1/1 (1892668) 4.36
Unicycler HiSeq 1,856,294 32.29 6 1.46 97.79 3703 + 7 part 93.92 1/1 (1892695) 0.05
MiSeq 1,865,687 32.28 7 1.15 98.08 3730 + 4 part 93.92 0/1 (393314) 10.28
Ion Torrent 1,855,936 32.29 6 1.46 98.06 3718 + 5 part 93.92 1/1 (1892586) 6.04