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Table 3 Hybrid assembly results for FSC237 isolate based on MinION data

From: Testing assembly strategies of Francisella tularensis genomes to infer an evolutionary conservation analysis of genomic structures

Assembler Short read library Total length (bp) GC (%) Contigs (> = 500 bp) NGA50 (Mb) Genome covered (%) Genomic features (Complete + partial) Complete Busco (%) True/all circular contigs (size) Errors (per 100 kb)
Canu/ Pilon HiSeq 1,949,612 32.26 1 1.95 99.97 3794 + 3 part 93.24 1/1 (1891217) 53.90
MiSeq 1,942,673 32.34 1 1.94 99.97 3794 + 3 part 62.16 0/0 351.18
Ion Torrent 1,948,850 32.27 1 1.95 99.97 3794 + 3 part 88.51 1/1 (1890592) 78.43
Flye/Pilon HiSeq 1,921,160 31.96 3 1.89 99.97 3793 + 3 part 77.70 1/1 (1893441) 98.56
MiSeq 1,944,710 31.58 3 1.92 99.97 3792 + 3 part 64.86 1/1 (1913901) 1059.83
Ion Torrent 1,921,860 31.95 3 1.89 99.97 3792 + 3 part 67.57 0/0 162.61
SPAdes HiSeq 1,892,530 32.28 1 1.86 98.21 3740 + 2 part 93.92 1/1 (1891993) 0.16
MiSeq 1,827,899 32.33 32 0.09 96.58 3592 + 15 part 93.92 0/0 20.84
Ion Torrent 1,858,435 32.28 2 1.40 98.19 3736 + 2 part 91.89 0/1 (1498148) 4.57
Unicycler HiSeq 1,892,775 32.26 1 1.89 100.00 3794 + 3 part 93.92 0/0 0.05
MiSeq 1,921,618 32.25 12 1.89 99.88 3789 + 3 part 93.92 1/1 (1891153) 57.40
Ion Torrent 1,892,630 32.26 1 1.89 100.00 3794 + 3 part 93.92 0/0 6.77