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Table 2 Common genes identified from different condition

From: Comparative methylation and RNA-seq expression analysis in CpG context to identify genes involved in Backfat vs. Liver diversification in Nanchukmacdon Pig

Ens_Id

chr

CpG

pvalue

padj

meth.diff

log2FoldChange

Gene

Coordinates

ENSSSCG00000032911

2

CpG:_196

1.77E-11

1.3E-10

-30.44324324

-2.326426281

TNNT3

989931-1317600

ENSSSCG00000008446

3

CpG:_73

6.44E-32

1.55E-30

-32.17542336

11.10018784

SIX2

95459937-95464066

ENSSSCG00000007574

3

CpG:_29

1.27E-15

1.28E-14

-27.95608782

4.797926491

SDK1

2814328-3324799

ENSSSCG00000038777

3

CpG:_2584

2.91E-19

3.74E-18

26.54798762

-2.310975194

C7orf50

648140-745331

ENSSSCG00000044546

3

CpG:_268

0.0000031

0.0000134

37.31729323

-2.390040267

ACTB

4091832-4096684

ENSSSCG00000000672

5

CpG:_30

5.58E-19

6.99E-18

-27.95833872

3.098361395

CLSTN3

63572062-63610618

ENSSSCG00000000978

5

CpG:_25

1.09E-10

7.53E-10

40.16694963

-5.798324853

MLC1

571961-591823

ENSSSCG00000033760

6

CpG:_45

2.42E-23

3.81E-22

-41.66461765

3.091738308

LTBP4

48831014-48861507

ENSSSCG00000030513

6

CpG:_22

1.64E-20

2.23E-19

-28.87776243

-3.566656672

CFAP74

63976011-64026767

ENSSSCG00000001004

7

CpG:_113

1.78E-79

1.8E-77

-47.36842105

-5.172667179

SLC22A23

1988695-2131709

ENSSSCG00000039756

7

CpG:_1263

0.000245614

0.000794638

-46.61016949

2.565410851

FOXC1

837171-838805

ENSSSCG00000000994

7

CpG:_48

1.98E-19

2.56E-18

-32.53353973

-2.603381323

GMDS

752239-1285550

ENSSSCG00000002490

7

CpG:_322

7.43E-17

8.2E-16

-26.30769231

4.557359006

GSC

116099047-116100966

ENSSSCG00000022383

14

CpG:_139

0.001072997

0.005378408

-28.33208302

-7.451598322

GATA4

14858159-14939941

ENSSSCG00000017095

16

CpG:_21

5.42E-20

7.2E-19

-29.06597882

3.18365959

SEMA5A

72492516-73329010

ENSSSCG00000016703

18

CpG:_55

3.93E-17

4.43E-16

-41.8356998

4.687258693

HOXA5

45421663-45432885