Table 2 Number of sequencing reads and alignment rate percentages calculated using HISAT2 for samples of Mentzelia speciosa. Root and leaf tissues are represented using “R” and “L” in the sample names
From: Inferring the genetic responses to acute drought stress across an ecological gradient
Sample | Number of reads | Alignment rate (%) |
|---|---|---|
001_R3 | 8,295,850 | 86.38 |
001_L1 | 10,983,630 | 88.64 |
002_R1 | 5,982,619 | 88.39 |
002_R3 | 10,553,058 | 87.53 |
003_L1 | 9,353,240 | 88.15 |
003_R3 | 10,251,241 | 80.62 |
004_L1 | 6,813,629 | 85.69 |
004_R3 | 6,811,305 | 88.27 |
006_L1 | 5,591,754 | 73.00 |
006_R3 | 6,575,857 | 87.92 |
007_L1 | 10,246,401 | 86.77 |
007_R3 | 10,797,019 | 89.76 |
008_L1 | 11,591,576 | 85.29 |
008_R3 | 11,046,039 | 92.32 |
009_L1 | 10,033,878 | 89.23 |
009_R2 | 10,228,942 | 87.18 |
011_FLOWER | 5,938,309 | 87.66 |
012_FRUIT | 270 | 65.74 |
013_STEM | 7,647,140 | 83.46 |
Average | 8,354,829.31 | 85.36 |