Table 8 Differentially expressed genes in root tissue from Mentzelia reverchonii from the drought-shocked treatment compared to the control. Measures of the log-fold change (logFC) and false discovery rate (FDR) were used to determine significance and direction of regulation
From: Inferring the genetic responses to acute drought stress across an ecological gradient
Transcript cluster ID | Annotation | logFC | FDR |
|---|---|---|---|
Cluster-38908.0 | Remorin-like isoform X2 | 6.30 | 0.0152 |
Cluster-49883.0 | NAC domain-containing protein 72 | 4.75 | 0.0152 |
Cluster-55672.0 | GATA transcription factor 8-like | 4.33 | 0.0152 |
Cluster-18781.0 | 21 kDa protein-like | 6.65 | 0.0223 |
Cluster-36496.0 | Non-specific lipid transfer protein GPI-anchored 2-like | 4.45 | 0.0224 |
Cluster-35195.0 | PREDICTED: uncharacterized protein LOC108988160 | −4.56 | 0.0224 |
Cluster-51946.0 | No homology | −4.31 | 0.0224 |
Cluster-25227.0 | U-box domain-containing protein 19 | 7.00 | 0.0224 |
Cluster-27607.0 | Squamosa promoter-binding protein 1-like | 4.65 | 0.0224 |
Cluster-35437.0 | CHK1 checkpoint-like protein | −10.93 | 0.0224 |
Cluster-56684.0 | No homology | −4.69 | 0.0224 |
Cluster-15975.0 | PREDICTED: uncharacterized protein LOC100854478 | 3.61 | 0.0224 |
Cluster-20450.0 | REF/SRPP-like protein At3g05500 | 5.96 | 0.0224 |
Cluster-41375.0 | Cellulose synthase A catalytic subunit 2 | 5.04 | 0.0224 |
Cluster-16220.0 | No homology | 5.34 | 0.0224 |
Cluster-47851.0 | No homology | 3.78 | 0.0289 |
Cluster-17790.0 | Acyl-lipid (9–3)-desaturase-like | 3.77 | 0.0289 |
Cluster-51094.0 | Unknown | −5.75 | 0.0289 |
Cluster-57461.0 | Ubiquitin-like protein | 3.35 | 0.0320 |
Cluster-25176.0 | Pollen-specific protein SF21-like | 3.72 | 0.0320 |
Cluster-38124.0 | L-ascorbate oxidase homolog | 5.81 | 0.0320 |
Cluster-34320.0 | No homology | −4.14 | 0.0331 |
Cluster-49004.0 | No homology | 4.83 | 0.0347 |
Cluster-30840.0 | Two-pore potassium channel 1-like | 4.93 | 0.0347 |
Cluster-20850.0 | Sodium/calcium exchanger NCL-like | 5.30 | 0.0347 |
Cluster-37384.0 | Sodium/calcium exchanger NCL-like | 3.91 | 0.0357 |
Cluster-48594.0 | Atp synthase subunit beta | −7.03 | 0.0362 |
Cluster-11814.0 | No homology | −3.32 | 0.0362 |
Cluster-39132.0 | Inositol-tetrakisphosphate 1-kinase 1-like | 4.30 | 0.0381 |
Cluster-38020.0 | No homology | −3.35 | 0.0440 |
Cluster-47551.0 | 10 kDa putative secreted protein | −6.65 | 0.0440 |
Cluster-55259.0 | No homology | −3.92 | 0.0440 |
Cluster-33758.0 | Hypothetical protein X975_24482, partial | −7.16 | 0.0453 |
Cluster-25182.0 | Glucose repressible protein Grg1 | −5.13 | 0.0453 |
Cluster-23747.0 | Predicted protein | −7.41 | 0.0453 |
Cluster-23745.0 | Probable WRKY transcription factor 75 | −3.18 | 0.0453 |
Cluster-24748.0 | Protein SRC2-like | 3.81 | 0.0453 |
Cluster-51512.0 | Predicted protein | −6.41 | 0.0453 |
Cluster-5078.0 | Late embryogenesis abundant protein | 4.99 | 0.0453 |
Cluster-53464.0 | Putative oRF58e | −9.37 | 0.0453 |
Cluster-41067.0 | UNKNOWN | −7.99 | 0.0453 |
Cluster-7120.0 | Hypothetical protein V565_194550, partial | −10.29 | 0.0467 |
Cluster-17962.0 | No homology | −8.68 | 0.0467 |
Cluster-27793.0 | Homeobox protein SBH1 | −5.01 | 0.0467 |
Cluster-23243.0 | 17.3 kDa class I heat shock protein-like | 5.14 | 0.0475 |
Cluster-22949.0 | PG1 protein, homology to Homo sapiens | −8.80 | 0.0477 |
Cluster-56300.0 | No homology | −5.63 | 0.0488 |
Cluster-24206.0 | Extradiol ring-cleavage dioxygenase-like | −2.75 | 0.0494 |
Cluster-33282.0 | No homology | −3.41 | 0.0496 |
Cluster-36817.1 | No homology | −3.60 | 0.0496 |
Cluster-16449.0 | Uncharacterised protein | −8.93 | 0.0496 |
Cluster-42928.0 | Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic | −3.68 | 0.0224 |
Cluster-36934.0 | Sec-independent protein translocase protein TATC, Chloroplastic | 6.05 | 0.0374 |