Table 2 Chloroplast gene content and functional classification in Platanthera ussuriensis

Photosystem I

psaB, psaA, psaI, psaJ, psaC

5

Photosystem II

psbA, psbK, psbI, psbM, psbD, psbC, psbZ, psbJ, psbL, psbF, psbE, psbB, psbT, psbN, psbH

15

Cytochrome b/f complex

petN, petA, petL, petG, petB^a, petD^a

6

ATP synthase

atpA, atpF^a, atpH, atpI, atpE, atpB

6

NADH dehydrogenase

ndhJ, ndhK, ndhC, ndhB^a,c, ndhF, ndhD, ndhE, ndhG, ndhI, ndhA^a, ndhH

12

RubisCO large subunit

rbcL

1

RNA polymerase

rpoC2, rpoC1^a, rpoB, rpoA

4

Ribosomal proteins (SSU)

rps12^b,c, rps16^a, rps2, rps14, rps4, rps18, rps11, rps8, rps3, rps19^c, rps7^c, rps15

15

Ribosomal proteins (LSU)

rpl33, rpl20, rpl36, rpl14, rpl16, rpl22, rpl2^a,c, rpl23^c, rpl32

11

Other genes

accD, infA, ccsA, clpP^b, matK

5

Hypothetical chloroplast reading frames (ycf)

ycf3^b, ycf4, ycf2^c, ycf1^c

6

Transfer RNAs

trnK-UUU^a, trnQ-UUG, trnS-GCU, trnG-UCC^a, trnR-UCU, trnC-GCA, trnD-GUC, trnY-GUA, trnE-UUC, trnT-GGU, trnS-UGA, trnG-GCC, trnfM-CAU, trnS-GGA, trnT-UGU, trnL-UAA^a, trnF-GAA, trnV-UAC^a, trnM-CAU, trnW-CCA, trnP-UGG, trnH-GUG^c, trnI-CAU^c, trnL-CAA^c, trnV-GAC^c, trnI-GAU^a,c, trnA-UGC^a,c, trnR-ACG^c, trnN-GUU^c, trnL-UAG

38

Ribosomal RNAs

rrn16^c, rrn23^c, rrn4.5^c, rrn5^c

8

Total

132