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Table 1 Summary of representative GO & KEGG enrichment of monthly DEGs

From: Time-course RNA-seq analysis reveals stage-specific and melatonin-triggered gene expression patterns during the hair follicle growth cycle in Capra hircus

Cluster

Description

p.adjust

Gene Name

Month4_Up

hair cycle

0.0276

PTCH2, FOXE1, HOXC13, FOXN1

Month5_Up

hair cycle

0.0082

PTCH2, FOXE1, FOXN1, HOXC13, KRT71, KRT25

Month4_Up

Hedgehog signaling pathway

0.0306

SHH, PTCH2, PTCH1

Month4_Up

Wnt signaling pathway

0.0428

FZD10, WIF1, LEF1, WNT11

Month6_Down

ECM-receptor interaction

0.0259

COL6A3, THBS3, FREM1, COL1A1

Month7_Down

ECM-receptor interaction

0.0218

FREM1, FRAS1, FREM2

Month8_Down

Wnt signaling pathway

0.0257

WNT6, NOTUM, SFRP2

Month8_Down

Hedgehog signaling pathway

0.0318

SHH, PTCH2

Month9_Up

Chemokine signaling pathway

0.0002

CCL17, CCL22, CCL2, LYN, RAC2, LOC102170772, PIK3CG, VAV1

Month9_Up

NF-κB signaling pathway

0.0020

CD40LG, LTB, ZAP70, LYN, BTK

  1. Note: The first two lines are derived from GO BP results and others are derived from KEGG results. P.adjust represents the p-values adjusted using the Benjamini & Hochberg method