Fig. 3
From: Genomic architecture of phenotypic extremes in a wild cervid
Manhattan plots representing pairwise genetic differentiation (Fisher’s Exact Test) for scaffolds of interest in 1000 bp sliding windows, with a step size of 500. Plots represent 200 kbp (+/- ) surrounding the most highly differentiated win dows and their associated gene regions; the top panel representing LGALS9 (ref0001370), MTMR2 (ref0001836), and DMBT1 (ref0000845) from the comparison of antler phenotype pools and the bottom panel representing FLVCR2 (ref0002232), SLC7A3 (ref0000892), and KRR1 (ref0002547) from the comparison of body size phenotype pools. The horizontal black like represents the false detection rate (p = 10-5), while the red line represents a conservative significance threshold (p = 10-7)