From: Genion, an accurate tool to detect gene fusion from long transcriptomics reads
Gene1 | Gene2 | # Reads | Validation | LongGF | Genion | SV Overlap | ||
---|---|---|---|---|---|---|---|---|
 |  |  |  | Rank | Rank | FiN | ff-igf |  |
BCAS4 | BCAS3 | 1183 | EXP | 1 | 1 | 5.15582 | 8070.86 | translocation |
RPS6KB1 | VMP1 | 349 | EXP | 2 | 2 | 0.25847 | 2046.15 | deletion |
SYTL2 | PICALM | 117 | SRS | 4 | 3 | 0.45365 | 857.222 | ✗ |
RPS6KB1 | DIAPH3 | 101 | SRS | 5 | 4 | 0.31655 | 626.54 | ✗ |
SLC25A24 | NBPF6 | 41 | SRS | 6 | 5 | 1.80952 | 472.95 | inversion |
PAPOLA | AK7 | 37 | SRS | 7 | 6 | 0.20536 | 369.71 | ✗ |
ESR1 | CCDC170 | 24 | SRS | 10 | 8 | 0.52564 | 308.07 | ✗ |
TXLNG | SYAP1 | 27 | EXP | 12 | 9 | 0.11986 | 275.28 | ✗ |
TBL1XR1 | RGS17 | 15 | SRS | 34 | 12 | 0.66667 | 153.69 | translocation |
MYO6 | SENP6 | 14 | SRS | 35 | 13 | 0.10683 | 147.50 | ✗ |
POP1 | MATN2 | 7 | SRS |  | RP | 0.15790 | 28.27 | ✗ |
MYH9 | EIF3D | 11 | SRS | 14 | RP | 0.04000 | 140.16 | ✗ |
FOXA1 | TTC6 | 26 | SRS | Â | Â | 4.10526 | 303.47 | inversion |
RSBN1 | AP4B1 | 7 | SRS | 19 |  | 0.01100 | 8.00 | ✗ |
ZNF217 | SULF2 | 16 | SRS | Â | RP | 0.00758 | 27.14 | deletion |
ARFGEF2 | SULF2 | 23 | SRS | 15 | RP | 0.03104 | 113.28 | inversion |